RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
HNRNPC-208ENST00000553753 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-208ENST00000553753 SLX4Q8IY92 1834 aa13.15□□□□□ -0.3
HNRNPC-208ENST00000553753 RASSF7Q02833 373 aa13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 SLC10A5Q5PT55 438 aa13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 SOGA3Q5TF21 947 aa13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 NLRP3Q96P20 1036 aa13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 STK31Q9BXU1 1019 aa13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 RNF181Q9P0P0 153 aa13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.31
HNRNPC-208ENST00000553753 RIC1Q4ADV7 1423 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 NFKBIEO00221 500 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 LMNB1P20700 586 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 C7orf43Q8WVR3 580 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 ISCA1Q9BUE6 129 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
HNRNPC-208ENST00000553753 SBF1O95248 1867 aa13.13□□□□□ -0.31
HNRNPC-208ENST00000553753 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
HNRNPC-208ENST00000553753 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
HNRNPC-208ENST00000553753 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-208ENST00000553753 HOXA10P31260 410 aaPredicted RBP13.13□□□□□ -0.31
HNRNPC-208ENST00000553753 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-208ENST00000553753 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 ZNF521Q96K83 1311 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 VAMP4O75379 141 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 PRELPP51888 382 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
HNRNPC-208ENST00000553753 HCLS1P14317 486 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 DIEXFQ68CQ4 756 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 FAM89AQ96GI7 184 aa13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 LTBP3Q9NS15 1303 aa13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
HNRNPC-208ENST00000553753 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 KSR2Q6VAB6 950 aa13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 PI4KAP1Q8N8J0 262 aa13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 MYD88Q99836 296 aa13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 ZC3H4Q9UPT8 1303 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-208ENST00000553753 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
HNRNPC-208ENST00000553753 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
HNRNPC-208ENST00000553753 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
HNRNPC-208ENST00000553753 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-208ENST00000553753 G2E3Q7L622 706 aa13.09□□□□□ -0.31
HNRNPC-208ENST00000553753 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
HNRNPC-208ENST00000553753 C1QTNF8P60827 252 aa13.08□□□□□ -0.32
HNRNPC-208ENST00000553753 FLIIQ13045 1269 aa13.08□□□□□ -0.32
HNRNPC-208ENST00000553753 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
HNRNPC-208ENST00000553753 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-208ENST00000553753 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
HNRNPC-208ENST00000553753 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 CWC25Q9NXE8 425 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 E9PSI1 815 aa13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 BBOX1O75936 387 aa13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 MIER1Q8N108 512 aa13.07□□□□□ -0.32
HNRNPC-208ENST00000553753 ABCC4O15439 1325 aa13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 GLTPD2A6NH11 291 aa13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 KIF3CO14782 793 aa13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
HNRNPC-208ENST00000553753 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 PSMD1Q99460 953 aa13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 LAMB2P55268 1798 aa13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 DICER1Q9UPY3 1922 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-208ENST00000553753 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 GRAPQ13588 217 aa13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
HNRNPC-208ENST00000553753 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1281.2 ms