RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CRY2Q49AN0 593 aa26.24■■□□□ 1.79
FOXA1-203ENST00000553751 UTP14AQ9BVJ6 771 aaKnown RBP26.24■■□□□ 1.79
FOXA1-203ENST00000553751 SLX4Q8IY92 1834 aa26.23■■□□□ 1.79
FOXA1-203ENST00000553751 NPR1P16066 1061 aa26.23■■□□□ 1.79
FOXA1-203ENST00000553751 MIER1Q8N108 512 aa26.23■■□□□ 1.79
FOXA1-203ENST00000553751 CNKSR1Q969H4 720 aa26.23■■□□□ 1.79
FOXA1-203ENST00000553751 TCERG1O14776 1098 aaKnown RBP26.22■■□□□ 1.79
FOXA1-203ENST00000553751 PRPF40BQ6NWY9 871 aaKnown RBP26.22■■□□□ 1.79
FOXA1-203ENST00000553751 ISCA1Q9BUE6 129 aa26.22■■□□□ 1.79
FOXA1-203ENST00000553751 STK31Q9BXU1 1019 aa26.22■■□□□ 1.79
FOXA1-203ENST00000553751 VAMP4O75379 141 aa26.21■■□□□ 1.79
FOXA1-203ENST00000553751 RIC3Q7Z5B4 369 aa26.2■■□□□ 1.78
FOXA1-203ENST00000553751 ATP5J2-PTCD1G3V325 749 aa26.19■■□□□ 1.78
FOXA1-203ENST00000553751 C21orf2O43822 256 aa26.19■■□□□ 1.78
FOXA1-203ENST00000553751 SLC10A5Q5PT55 438 aa26.19■■□□□ 1.78
FOXA1-203ENST00000553751 C3orf67Q6ZVT6 689 aa26.19■■□□□ 1.78
FOXA1-203ENST00000553751 RASSF7Q02833 373 aa26.18■■□□□ 1.78
FOXA1-203ENST00000553751 ZNF219Q9P2Y4 722 aaPredicted RBP26.18■■□□□ 1.78
FOXA1-203ENST00000553751 TRMT112Q9UI30 125 aaKnown RBP26.18■■□□□ 1.78
FOXA1-203ENST00000553751 SH3TC1Q8TE82 1336 aa26.17■■□□□ 1.78
FOXA1-203ENST00000553751 NFKBIEO00221 500 aa26.17■■□□□ 1.78
FOXA1-203ENST00000553751 DDX58O95786 925 aaKnown RBP26.17■■□□□ 1.78
FOXA1-203ENST00000553751 SLC4A2P04920 1241 aa26.17■■□□□ 1.78
FOXA1-203ENST00000553751 TRIM28Q13263 835 aaKnown RBP26.17■■□□□ 1.78
FOXA1-203ENST00000553751 G2E3Q7L622 706 aa26.17■■□□□ 1.78
FOXA1-203ENST00000553751 ZNF428Q96B54 188 aa26.17■■□□□ 1.78
FOXA1-203ENST00000553751 SBF1O95248 1867 aa26.17■■□□□ 1.78
FOXA1-203ENST00000553751 LAMB2P55268 1798 aa26.16■■□□□ 1.78
FOXA1-203ENST00000553751 C9orf131Q5VYM1 1079 aa26.16■■□□□ 1.78
FOXA1-203ENST00000553751 SYNE4Q8N205 404 aa26.16■■□□□ 1.78
FOXA1-203ENST00000553751 C7orf43Q8WVR3 580 aa26.16■■□□□ 1.78
FOXA1-203ENST00000553751 FER1L6Q2WGJ9 1857 aa26.16■■□□□ 1.78
FOXA1-203ENST00000553751 DDX60Q8IY21 1712 aaKnown RBP26.15■■□□□ 1.78
FOXA1-203ENST00000553751 HOXA10P31260 410 aaPredicted RBP26.15■■□□□ 1.78
FOXA1-203ENST00000553751 MYD88Q99836 296 aa26.15■■□□□ 1.78
FOXA1-203ENST00000553751 E9PSI1 815 aa26.14■■□□□ 1.78
FOXA1-203ENST00000553751 PRELPP51888 382 aa26.14■■□□□ 1.78
FOXA1-203ENST00000553751 KSR2Q6VAB6 950 aa26.14■■□□□ 1.78
FOXA1-203ENST00000553751 RPGRQ92834 1020 aaKnown RBP26.14■■□□□ 1.78
FOXA1-203ENST00000553751 NLRP3Q96P20 1036 aa26.14■■□□□ 1.78
FOXA1-203ENST00000553751 METTL22Q9BUU2 404 aaPredicted RBP26.14■■□□□ 1.78
FOXA1-203ENST00000553751 MAP3K2Q9Y2U5 619 aa26.14■■□□□ 1.78
FOXA1-203ENST00000553751 CACNA1FO60840 1977 aa26.14■■□□□ 1.77
FOXA1-203ENST00000553751 PI4KAP2A4QPH2 592 aa26.13■■□□□ 1.77
FOXA1-203ENST00000553751 HCLS1P14317 486 aaPredicted RBP26.13■■□□□ 1.77
FOXA1-203ENST00000553751 ALDH1B1P30837 517 aa26.13■■□□□ 1.77
FOXA1-203ENST00000553751 FLIIQ13045 1269 aa26.13■■□□□ 1.77
FOXA1-203ENST00000553751 PI4KAP1Q8N8J0 262 aa26.13■■□□□ 1.77
FOXA1-203ENST00000553751 SOGA3Q5TF21 947 aa26.12■■□□□ 1.77
FOXA1-203ENST00000553751 FAM89AQ96GI7 184 aa26.12■■□□□ 1.77
FOXA1-203ENST00000553751 RNF181Q9P0P0 153 aa26.12■■□□□ 1.77
FOXA1-203ENST00000553751 SLFN5Q08AF3 891 aa26.11■■□□□ 1.77
FOXA1-203ENST00000553751 LTBP3Q9NS15 1303 aa26.11■■□□□ 1.77
FOXA1-203ENST00000553751 LMNB1P20700 586 aa26.1■■□□□ 1.77
FOXA1-203ENST00000553751 CCDC191Q8NCU4 936 aa26.1■■□□□ 1.77
FOXA1-203ENST00000553751 RBM17Q96I25 401 aaKnown RBP26.1■■□□□ 1.77
FOXA1-203ENST00000553751 CRAMP1Q96RY5 1269 aa26.1■■□□□ 1.77
FOXA1-203ENST00000553751 SNED1Q8TER0 1413 aa26.09■■□□□ 1.77
FOXA1-203ENST00000553751 CCDC93Q567U6 631 aa26.09■■□□□ 1.77
FOXA1-203ENST00000553751 OLFM4Q6UX06 510 aa26.09■■□□□ 1.77
FOXA1-203ENST00000553751 CDCA7LQ96GN5 454 aa26.09■■□□□ 1.77
FOXA1-203ENST00000553751 IGKV5-2P06315 115 aa26.08■■□□□ 1.77
FOXA1-203ENST00000553751 TAOK3Q9H2K8 898 aa26.08■■□□□ 1.77
FOXA1-203ENST00000553751 TIAM2Q8IVF5 1701 aa26.08■■□□□ 1.76
FOXA1-203ENST00000553751 FKBP5Q13451 457 aaPredicted RBP26.07■■□□□ 1.76
FOXA1-203ENST00000553751 RTL5Q5HYW3 569 aaPredicted RBP26.07■■□□□ 1.76
FOXA1-203ENST00000553751 ZBTB38Q8NAP3 1195 aaPredicted RBP26.07■■□□□ 1.76
FOXA1-203ENST00000553751 CWC25Q9NXE8 425 aaPredicted RBP26.07■■□□□ 1.76
FOXA1-203ENST00000553751 ABCC4O15439 1325 aa26.07■■□□□ 1.76
FOXA1-203ENST00000553751 ZNF526Q8TF50 670 aaPredicted RBP26.06■■□□□ 1.76
FOXA1-203ENST00000553751 CCDC88AQ3V6T2 1871 aa26.06■■□□□ 1.76
FOXA1-203ENST00000553751 IRS4O14654 1257 aaPredicted RBP26.05■■□□□ 1.76
FOXA1-203ENST00000553751 PCCAP05165 728 aaPredicted RBP26.05■■□□□ 1.76
FOXA1-203ENST00000553751 SLC51AQ86UW1 340 aa26.05■■□□□ 1.76
FOXA1-203ENST00000553751 TRMT2AQ8IZ69 625 aaKnown RBP26.05■■□□□ 1.76
FOXA1-203ENST00000553751 GPBP1L1Q9HC44 474 aaPredicted RBP26.05■■□□□ 1.76
FOXA1-203ENST00000553751 PPEF1O14829 653 aaPredicted RBP26.04■■□□□ 1.76
FOXA1-203ENST00000553751 NEXNQ0ZGT2 675 aa26.04■■□□□ 1.76
FOXA1-203ENST00000553751 ZC3H4Q9UPT8 1303 aaKnown RBP26.04■■□□□ 1.76
FOXA1-203ENST00000553751 CWF19L2Q2TBE0 894 aaKnown RBP26.03■■□□□ 1.76
FOXA1-203ENST00000553751 RTKN2Q8IZC4 609 aa26.03■■□□□ 1.76
FOXA1-203ENST00000553751 DNAAF4Q8WXU2 420 aa26.03■■□□□ 1.76
FOXA1-203ENST00000553751 DICER1Q9UPY3 1922 aaKnown RBP26.03■■□□□ 1.76
FOXA1-203ENST00000553751 NEURL1BA8MQ27 555 aa26.02■■□□□ 1.76
FOXA1-203ENST00000553751 FKBP4Q02790 459 aaKnown RBP eCLIP26.02■■□□□ 1.76
FOXA1-203ENST00000553751 SF3B3Q15393 1217 aaKnown RBP26.02■■□□□ 1.76
FOXA1-203ENST00000553751 CC2D2BQ6DHV5 1058 aa26.01■■□□□ 1.75
FOXA1-203ENST00000553751 COL4A1P02462 1669 aa26■■□□□ 1.75
FOXA1-203ENST00000553751 CDHR2Q9BYE9 1310 aa26■■□□□ 1.75
FOXA1-203ENST00000553751 DDX46Q7L014 1031 aaKnown RBP26■■□□□ 1.75
FOXA1-203ENST00000553751 JARID2Q92833 1246 aaPredicted RBP26■■□□□ 1.75
FOXA1-203ENST00000553751 TAF1P21675 1872 aa26■■□□□ 1.75
FOXA1-203ENST00000553751 GRAPQ13588 217 aa25.99■■□□□ 1.75
FOXA1-203ENST00000553751 GRAPLQ8TC17 118 aaPredicted RBP25.99■■□□□ 1.75
FOXA1-203ENST00000553751 F6X3S4 739 aa25.98■■□□□ 1.75
FOXA1-203ENST00000553751 HSP90B1P14625 803 aaKnown RBP25.98■■□□□ 1.75
FOXA1-203ENST00000553751 LINS1Q8NG48 757 aa25.98■■□□□ 1.75
FOXA1-203ENST00000553751 PSMD1Q99460 953 aa25.98■■□□□ 1.75
FOXA1-203ENST00000553751 ATP6V0A2Q9Y487 856 aa25.98■■□□□ 1.75
FOXA1-203ENST00000553751 LRRC37AA6NMS7 1700 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms