RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 TRIM28Q13263 835 aaKnown RBP18.17■□□□□ 0.5
SV2B-204ENST00000553727 GPR162Q16538 588 aa18.17■□□□□ 0.5
SV2B-204ENST00000553727 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
SV2B-204ENST00000553727 PXDNLA1KZ92 1463 aa18.17■□□□□ 0.5
SV2B-204ENST00000553727 NRXN2Q9P2S2 1712 aa18.17■□□□□ 0.5
SV2B-204ENST00000553727 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
SV2B-204ENST00000553727 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
SV2B-204ENST00000553727 SYNE4Q8N205 404 aa18.16■□□□□ 0.5
SV2B-204ENST00000553727 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
SV2B-204ENST00000553727 CWC25Q9NXE8 425 aaPredicted RBP18.16■□□□□ 0.5
SV2B-204ENST00000553727 IBTKQ9P2D0 1353 aaPredicted RBP18.16■□□□□ 0.5
SV2B-204ENST00000553727 IGKV5-2P06315 115 aa18.15■□□□□ 0.5
SV2B-204ENST00000553727 KCNA3P22001 575 aa18.15■□□□□ 0.5
SV2B-204ENST00000553727 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
SV2B-204ENST00000553727 FAM89AQ96GI7 184 aa18.15■□□□□ 0.5
SV2B-204ENST00000553727 PIM2Q9P1W9 311 aa18.15■□□□□ 0.5
SV2B-204ENST00000553727 SH3TC1Q8TE82 1336 aa18.15■□□□□ 0.5
SV2B-204ENST00000553727 ABCC12Q96J65 1359 aa18.15■□□□□ 0.5
SV2B-204ENST00000553727 ARFGEF2Q9Y6D5 1785 aa18.14■□□□□ 0.5
SV2B-204ENST00000553727 HCLS1P14317 486 aaPredicted RBP18.14■□□□□ 0.49
SV2B-204ENST00000553727 JARID2Q92833 1246 aaPredicted RBP18.14■□□□□ 0.49
SV2B-204ENST00000553727 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
SV2B-204ENST00000553727 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
SV2B-204ENST00000553727 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
SV2B-204ENST00000553727 PTPRCP08575 1304 aa18.14■□□□□ 0.49
SV2B-204ENST00000553727 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
SV2B-204ENST00000553727 BCAR3O75815 825 aa18.13■□□□□ 0.49
SV2B-204ENST00000553727 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
SV2B-204ENST00000553727 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
SV2B-204ENST00000553727 NLRP3Q96P20 1036 aa18.13■□□□□ 0.49
SV2B-204ENST00000553727 RNF123Q5XPI4 1314 aa18.13■□□□□ 0.49
SV2B-204ENST00000553727 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
SV2B-204ENST00000553727 SRGNP10124 158 aa18.12■□□□□ 0.49
SV2B-204ENST00000553727 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
SV2B-204ENST00000553727 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
SV2B-204ENST00000553727 ANKRD36CQ5JPF3 1778 aa18.12■□□□□ 0.49
SV2B-204ENST00000553727 PCCAP05165 728 aaPredicted RBP18.11■□□□□ 0.49
SV2B-204ENST00000553727 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.49
SV2B-204ENST00000553727 BEND3Q5T5X7 828 aa18.11■□□□□ 0.49
SV2B-204ENST00000553727 TTLL6Q8N841 843 aa18.11■□□□□ 0.49
SV2B-204ENST00000553727 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
SV2B-204ENST00000553727 MASTLQ96GX5 879 aa18.11■□□□□ 0.49
SV2B-204ENST00000553727 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
SV2B-204ENST00000553727 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
SV2B-204ENST00000553727 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
SV2B-204ENST00000553727 NPR1P16066 1061 aa18.1■□□□□ 0.49
SV2B-204ENST00000553727 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
SV2B-204ENST00000553727 GCKRQ14397 625 aa18.1■□□□□ 0.49
SV2B-204ENST00000553727 C3orf67Q6ZVT6 689 aa18.1■□□□□ 0.49
SV2B-204ENST00000553727 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
SV2B-204ENST00000553727 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
SV2B-204ENST00000553727 KIF16BQ96L93 1317 aa18.09■□□□□ 0.49
SV2B-204ENST00000553727 STYK1Q6J9G0 422 aa18.09■□□□□ 0.49
SV2B-204ENST00000553727 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
SV2B-204ENST00000553727 ANKRD31Q8N7Z5 1873 aa18.08■□□□□ 0.49
SV2B-204ENST00000553727 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
SV2B-204ENST00000553727 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.48
SV2B-204ENST00000553727 CNKSR1Q969H4 720 aa18.08■□□□□ 0.48
SV2B-204ENST00000553727 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.48
SV2B-204ENST00000553727 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
SV2B-204ENST00000553727 KIAA1551Q9HCM1 1747 aa18.07■□□□□ 0.48
SV2B-204ENST00000553727 H7C1W4 665 aa18.07■□□□□ 0.48
SV2B-204ENST00000553727 GRIN3BO60391 1043 aa18.07■□□□□ 0.48
SV2B-204ENST00000553727 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
SV2B-204ENST00000553727 CRY2Q49AN0 593 aa18.07■□□□□ 0.48
SV2B-204ENST00000553727 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
SV2B-204ENST00000553727 RIC1Q4ADV7 1423 aa18.06■□□□□ 0.48
SV2B-204ENST00000553727 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
SV2B-204ENST00000553727 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
SV2B-204ENST00000553727 ARHGAP45Q92619 1136 aa18.06■□□□□ 0.48
SV2B-204ENST00000553727 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
SV2B-204ENST00000553727 PDE8AO60658 829 aa18.05■□□□□ 0.48
SV2B-204ENST00000553727 PRPF40BQ6NWY9 871 aaKnown RBP18.05■□□□□ 0.48
SV2B-204ENST00000553727 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
SV2B-204ENST00000553727 CDHR2Q9BYE9 1310 aa18.04■□□□□ 0.48
SV2B-204ENST00000553727 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
SV2B-204ENST00000553727 ATF7IPQ6VMQ6 1270 aa18.04■□□□□ 0.48
SV2B-204ENST00000553727 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
SV2B-204ENST00000553727 DDX46Q7L014 1031 aaKnown RBP18.04■□□□□ 0.48
SV2B-204ENST00000553727 CCDC85AQ96PX6 553 aaPredicted RBP18.04■□□□□ 0.48
SV2B-204ENST00000553727 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
SV2B-204ENST00000553727 GRM8O00222 908 aa18.03■□□□□ 0.48
SV2B-204ENST00000553727 C21orf2O43822 256 aa18.03■□□□□ 0.48
SV2B-204ENST00000553727 CCT4P50991 539 aaKnown RBP18.03■□□□□ 0.48
SV2B-204ENST00000553727 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
SV2B-204ENST00000553727 ZKSCAN2Q63HK3 967 aa18.03■□□□□ 0.48
SV2B-204ENST00000553727 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
SV2B-204ENST00000553727 CRAMP1Q96RY5 1269 aa18.03■□□□□ 0.48
SV2B-204ENST00000553727 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
SV2B-204ENST00000553727 TRIM27P14373 513 aa18.02■□□□□ 0.48
SV2B-204ENST00000553727 CASP7P55210 303 aa18.02■□□□□ 0.48
SV2B-204ENST00000553727 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
SV2B-204ENST00000553727 CTSWP56202 376 aa18.01■□□□□ 0.47
SV2B-204ENST00000553727 CCDC152Q4G0S7 254 aa18.01■□□□□ 0.47
SV2B-204ENST00000553727 ABCC4O15439 1325 aa18■□□□□ 0.47
SV2B-204ENST00000553727 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
SV2B-204ENST00000553727 NBPF7P0C2Y1 421 aaPredicted RBP17.99■□□□□ 0.47
SV2B-204ENST00000553727 GRAPQ13588 217 aa17.99■□□□□ 0.47
SV2B-204ENST00000553727 OLFM4Q6UX06 510 aa17.99■□□□□ 0.47
SV2B-204ENST00000553727 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms