RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
ATL1-203ENST00000553509 ADCY9O60503 1353 aa16.98■□□□□ 0.31
ATL1-203ENST00000553509 PTPRCP08575 1304 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 H0YIN7 160 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 MYD88Q99836 296 aa16.97■□□□□ 0.31
ATL1-203ENST00000553509 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.31
ATL1-203ENST00000553509 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
ATL1-203ENST00000553509 MRPL50Q8N5N7 158 aaKnown RBP16.96■□□□□ 0.31
ATL1-203ENST00000553509 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
ATL1-203ENST00000553509 MYH3P11055 1940 aa16.96■□□□□ 0.3
ATL1-203ENST00000553509 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
ATL1-203ENST00000553509 TNRC6CQ9HCJ0 1690 aaKnown RBP16.95■□□□□ 0.3
ATL1-203ENST00000553509 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
ATL1-203ENST00000553509 DPEP1P16444 411 aa16.95■□□□□ 0.3
ATL1-203ENST00000553509 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
ATL1-203ENST00000553509 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
ATL1-203ENST00000553509 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
ATL1-203ENST00000553509 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
ATL1-203ENST00000553509 PIM2Q9P1W9 311 aa16.95■□□□□ 0.3
ATL1-203ENST00000553509 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
ATL1-203ENST00000553509 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
ATL1-203ENST00000553509 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
ATL1-203ENST00000553509 GPR162Q16538 588 aa16.94■□□□□ 0.3
ATL1-203ENST00000553509 ERFEQ4G0M1 354 aa16.94■□□□□ 0.3
ATL1-203ENST00000553509 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
ATL1-203ENST00000553509 CHD4Q14839 1912 aa16.94■□□□□ 0.3
ATL1-203ENST00000553509 CHRNA5P30532 468 aa16.93■□□□□ 0.3
ATL1-203ENST00000553509 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
ATL1-203ENST00000553509 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
ATL1-203ENST00000553509 LINS1Q8NG48 757 aa16.93■□□□□ 0.3
ATL1-203ENST00000553509 BCL2L13Q9BXK5 485 aa16.93■□□□□ 0.3
ATL1-203ENST00000553509 KLRG2A4D1S0 409 aaPredicted RBP16.92■□□□□ 0.3
ATL1-203ENST00000553509 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
ATL1-203ENST00000553509 DALRD3Q5D0E6 543 aaKnown RBP16.92■□□□□ 0.3
ATL1-203ENST00000553509 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
ATL1-203ENST00000553509 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
ATL1-203ENST00000553509 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
ATL1-203ENST00000553509 MASTLQ96GX5 879 aa16.92■□□□□ 0.3
ATL1-203ENST00000553509 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
ATL1-203ENST00000553509 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
ATL1-203ENST00000553509 IGKV5-2P06315 115 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 SRGNP10124 158 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 NPR1P16066 1061 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 KCNA3P22001 575 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 CNKSR1Q969H4 720 aa16.91■□□□□ 0.3
ATL1-203ENST00000553509 F6X3S4 739 aa16.9■□□□□ 0.3
ATL1-203ENST00000553509 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
ATL1-203ENST00000553509 RPGRQ92834 1020 aaKnown RBP16.9■□□□□ 0.3
ATL1-203ENST00000553509 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATL1-203ENST00000553509 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
ATL1-203ENST00000553509 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
ATL1-203ENST00000553509 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
ATL1-203ENST00000553509 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
ATL1-203ENST00000553509 API5Q9BZZ5 524 aaKnown RBP16.89■□□□□ 0.29
ATL1-203ENST00000553509 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
ATL1-203ENST00000553509 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
ATL1-203ENST00000553509 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 ALDH1B1P30837 517 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 GCKRQ14397 625 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 BEND3Q5T5X7 828 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 SLC4A10Q6U841 1118 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 SLX4Q8IY92 1834 aa16.88■□□□□ 0.29
ATL1-203ENST00000553509 HCLS1P14317 486 aaPredicted RBP16.87■□□□□ 0.29
ATL1-203ENST00000553509 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATL1-203ENST00000553509 RBM17Q96I25 401 aaKnown RBP16.87■□□□□ 0.29
ATL1-203ENST00000553509 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
ATL1-203ENST00000553509 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
ATL1-203ENST00000553509 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
ATL1-203ENST00000553509 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
ATL1-203ENST00000553509 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
ATL1-203ENST00000553509 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
ATL1-203ENST00000553509 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
ATL1-203ENST00000553509 PDE8AO60658 829 aa16.85■□□□□ 0.29
ATL1-203ENST00000553509 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
ATL1-203ENST00000553509 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
ATL1-203ENST00000553509 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
ATL1-203ENST00000553509 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
ATL1-203ENST00000553509 H7C1W4 665 aa16.84■□□□□ 0.29
ATL1-203ENST00000553509 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
ATL1-203ENST00000553509 SF3B3Q15393 1217 aaKnown RBP16.84■□□□□ 0.29
ATL1-203ENST00000553509 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
ATL1-203ENST00000553509 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
ATL1-203ENST00000553509 GRM8O00222 908 aa16.83■□□□□ 0.28
ATL1-203ENST00000553509 BCAR3O75815 825 aa16.83■□□□□ 0.28
ATL1-203ENST00000553509 CCDC152Q4G0S7 254 aa16.83■□□□□ 0.28
ATL1-203ENST00000553509 FRAT1Q92837 279 aaPredicted RBP16.83■□□□□ 0.28
ATL1-203ENST00000553509 TAF1P21675 1872 aa16.82■□□□□ 0.28
ATL1-203ENST00000553509 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
ATL1-203ENST00000553509 CTSWP56202 376 aa16.82■□□□□ 0.28
ATL1-203ENST00000553509 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
ATL1-203ENST00000553509 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
ATL1-203ENST00000553509 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms