RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 PHF14O94880 888 aa18.86■□□□□ 0.61
ABCD4-218ENST00000553486 NBPF7P0C2Y1 421 aaPredicted RBP18.86■□□□□ 0.61
ABCD4-218ENST00000553486 PDE1AP54750 535 aa18.86■□□□□ 0.61
ABCD4-218ENST00000553486 PDIA6Q15084 440 aa18.86■□□□□ 0.61
ABCD4-218ENST00000553486 PPP1R42Q7Z4L9 355 aa18.86■□□□□ 0.61
ABCD4-218ENST00000553486 LINC00116Q8NCU8 138 aa18.86■□□□□ 0.61
ABCD4-218ENST00000553486 SDSP20132 328 aa18.85■□□□□ 0.61
ABCD4-218ENST00000553486 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
ABCD4-218ENST00000553486 C9orf78Q9NZ63 289 aaPredicted RBP18.85■□□□□ 0.61
ABCD4-218ENST00000553486 YBX3P16989 372 aaKnown RBP eCLIP18.84■□□□□ 0.61
ABCD4-218ENST00000553486 SSFA2P28290 1259 aa18.84■□□□□ 0.61
ABCD4-218ENST00000553486 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
ABCD4-218ENST00000553486 CD2APQ9Y5K6 639 aa18.84■□□□□ 0.61
ABCD4-218ENST00000553486 ITPK1Q13572 414 aa18.84■□□□□ 0.61
ABCD4-218ENST00000553486 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
ABCD4-218ENST00000553486 ATG3Q9NT62 314 aa18.84■□□□□ 0.61
ABCD4-218ENST00000553486 ERVV-2B6SEH9 535 aa18.83■□□□□ 0.6
ABCD4-218ENST00000553486 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
ABCD4-218ENST00000553486 ATP6V1AP38606 617 aa18.83■□□□□ 0.6
ABCD4-218ENST00000553486 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
ABCD4-218ENST00000553486 HSP90AB4PQ58FF6 505 aa18.83■□□□□ 0.6
ABCD4-218ENST00000553486 SALL3Q9BXA9 1300 aa18.82■□□□□ 0.6
ABCD4-218ENST00000553486 UBR3Q6ZT12 1888 aa18.82■□□□□ 0.6
ABCD4-218ENST00000553486 GRIN3BO60391 1043 aa18.82■□□□□ 0.6
ABCD4-218ENST00000553486 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
ABCD4-218ENST00000553486 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
ABCD4-218ENST00000553486 MX1P20591 662 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 GNPATO15228 680 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 MTX1Q13505 466 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 HSCBQ8IWL3 235 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 STAP2Q9UGK3 403 aa18.81■□□□□ 0.6
ABCD4-218ENST00000553486 MYL6BP14649 208 aa18.8■□□□□ 0.6
ABCD4-218ENST00000553486 SNX21Q969T3 373 aa18.8■□□□□ 0.6
ABCD4-218ENST00000553486 KIF1BPQ96EK5 621 aa18.8■□□□□ 0.6
ABCD4-218ENST00000553486 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
ABCD4-218ENST00000553486 AOX1Q06278 1338 aa18.8■□□□□ 0.6
ABCD4-218ENST00000553486 XAGE3Q8WTP9 111 aa18.79■□□□□ 0.6
ABCD4-218ENST00000553486 UTYO14607 1347 aa18.79■□□□□ 0.6
ABCD4-218ENST00000553486 GRM8O00222 908 aa18.79■□□□□ 0.6
ABCD4-218ENST00000553486 CWF19L2Q2TBE0 894 aaKnown RBP18.79■□□□□ 0.6
ABCD4-218ENST00000553486 COPS6Q7L5N1 327 aa18.79■□□□□ 0.6
ABCD4-218ENST00000553486 NFKBIBQ15653 356 aa18.78■□□□□ 0.6
ABCD4-218ENST00000553486 RHPN1Q8TCX5 695 aa18.78■□□□□ 0.6
ABCD4-218ENST00000553486 SLC4A9Q96Q91 983 aa18.77■□□□□ 0.6
ABCD4-218ENST00000553486 METTL22Q9BUU2 404 aaPredicted RBP18.77■□□□□ 0.6
ABCD4-218ENST00000553486 ERBB4Q15303 1308 aa18.77■□□□□ 0.6
ABCD4-218ENST00000553486 UBR2Q8IWV8 1755 aa18.77■□□□□ 0.6
ABCD4-218ENST00000553486 REC8O95072 547 aa18.77■□□□□ 0.59
ABCD4-218ENST00000553486 ANKRD13DQ6ZTN6 518 aa18.77■□□□□ 0.59
ABCD4-218ENST00000553486 KIF2CQ99661 725 aa18.76■□□□□ 0.59
ABCD4-218ENST00000553486 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
ABCD4-218ENST00000553486 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
ABCD4-218ENST00000553486 IL1RAPL2Q9NP60 686 aa18.76■□□□□ 0.59
ABCD4-218ENST00000553486 CEP350Q5VT06 3117 aa18.76■□□□□ 0.59
ABCD4-218ENST00000553486 C1QTNF8P60827 252 aa18.75■□□□□ 0.59
ABCD4-218ENST00000553486 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
ABCD4-218ENST00000553486 USP26Q9BXU7 913 aa18.75■□□□□ 0.59
ABCD4-218ENST00000553486 NEURL1BA8MQ27 555 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 ERC2O15083 957 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
ABCD4-218ENST00000553486 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 RTCBQ9Y3I0 505 aaKnown RBP18.74■□□□□ 0.59
ABCD4-218ENST00000553486 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 MYD88Q99836 296 aa18.74■□□□□ 0.59
ABCD4-218ENST00000553486 AFDNP55196 1824 aaKnown RBP18.73■□□□□ 0.59
ABCD4-218ENST00000553486 TRIM6-TRIM34B2RNG4 842 aa18.73■□□□□ 0.59
ABCD4-218ENST00000553486 ZNF831Q5JPB2 1677 aa18.73■□□□□ 0.59
ABCD4-218ENST00000553486 AK9Q5TCS8 1911 aa18.73■□□□□ 0.59
ABCD4-218ENST00000553486 ARFGEF2Q9Y6D5 1785 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 MMP10P09238 476 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 GCKRQ14397 625 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 TRAPPC3LQ5T215 181 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
ABCD4-218ENST00000553486 TSHZ3Q63HK5 1081 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 CNTNAP4Q9C0A0 1308 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 ADRA2BP18089 450 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
ABCD4-218ENST00000553486 PLBD2Q8NHP8 589 aa18.71■□□□□ 0.59
ABCD4-218ENST00000553486 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
ABCD4-218ENST00000553486 KCPQ6ZWJ8 1503 aa18.71■□□□□ 0.59
ABCD4-218ENST00000553486 RABEP1Q15276 862 aa18.7■□□□□ 0.58
ABCD4-218ENST00000553486 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
ABCD4-218ENST00000553486 BICC1Q9H694 974 aaKnown RBP18.7■□□□□ 0.58
ABCD4-218ENST00000553486 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
ABCD4-218ENST00000553486 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
ABCD4-218ENST00000553486 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
ABCD4-218ENST00000553486 KAZALD1Q96I82 304 aa18.7■□□□□ 0.58
ABCD4-218ENST00000553486 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
ABCD4-218ENST00000553486 TTC41PQ6P2S7 1318 aa18.69■□□□□ 0.58
ABCD4-218ENST00000553486 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
ABCD4-218ENST00000553486 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
ABCD4-218ENST00000553486 SPRYD3Q8NCJ5 442 aa18.69■□□□□ 0.58
ABCD4-218ENST00000553486 COL5A3P25940 1745 aaPredicted RBP18.68■□□□□ 0.58
ABCD4-218ENST00000553486 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
ABCD4-218ENST00000553486 CHMLP26374 656 aa18.68■□□□□ 0.58
ABCD4-218ENST00000553486 G3BP1Q13283 466 aaKnown RBP eCLIP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms