RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TRIP4Q15650 581 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-210ENST00000553455 MRRFQ96E11 262 aaKnown RBP8.73□□□□□ -1.01
SYNE2-210ENST00000553455 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-210ENST00000553455 NIF3L1Q9GZT8 377 aa8.73□□□□□ -1.01
SYNE2-210ENST00000553455 RTCBQ9Y3I0 505 aaKnown RBP8.73□□□□□ -1.01
SYNE2-210ENST00000553455 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
SYNE2-210ENST00000553455 ZNF326Q5BKZ1 582 aaKnown RBP8.72□□□□□ -1.01
SYNE2-210ENST00000553455 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
SYNE2-210ENST00000553455 NLRP8Q86W28 1048 aa8.72□□□□□ -1.01
SYNE2-210ENST00000553455 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
SYNE2-210ENST00000553455 NEUROD4Q9HD90 331 aa8.72□□□□□ -1.01
SYNE2-210ENST00000553455 SLC35F4A4IF30 521 aa8.71□□□□□ -1.02
SYNE2-210ENST00000553455 PCSK2P16519 638 aa8.71□□□□□ -1.02
SYNE2-210ENST00000553455 MAPK8P45983 427 aa8.71□□□□□ -1.02
SYNE2-210ENST00000553455 PTSQ03393 145 aa8.71□□□□□ -1.02
SYNE2-210ENST00000553455 ORC1Q13415 861 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
SYNE2-210ENST00000553455 ENOX2Q16206 610 aaKnown RBP8.7□□□□□ -1.02
SYNE2-210ENST00000553455 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 PGBD3Q8N328 593 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 CEP63Q96MT8 703 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 SETDB2Q96T68 719 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 WWC3Q9ULE0 1092 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 GJA3Q9Y6H8 435 aa8.7□□□□□ -1.02
SYNE2-210ENST00000553455 RPLP1P05386 114 aaKnown RBP8.69□□□□□ -1.02
SYNE2-210ENST00000553455 LDHBP07195 334 aaKnown RBP8.69□□□□□ -1.02
SYNE2-210ENST00000553455 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
SYNE2-210ENST00000553455 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
SYNE2-210ENST00000553455 PNMA6FA0A0J9YX94 578 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
SYNE2-210ENST00000553455 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 XKR5Q6UX68 686 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
SYNE2-210ENST00000553455 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 IGSF5Q9NSI5 407 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 RNF19AQ9NV58 838 aa8.68□□□□□ -1.02
SYNE2-210ENST00000553455 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-210ENST00000553455 EFSO43281 561 aa8.67□□□□□ -1.02
SYNE2-210ENST00000553455 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
SYNE2-210ENST00000553455 FAM157BP0CG42 384 aa8.67□□□□□ -1.02
SYNE2-210ENST00000553455 VAMP1P23763 118 aa8.67□□□□□ -1.02
SYNE2-210ENST00000553455 CSRNP1Q96S65 589 aa8.67□□□□□ -1.02
SYNE2-210ENST00000553455 IRX2Q9BZI1 471 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-210ENST00000553455 HCN2Q9UL51 889 aa8.67□□□□□ -1.02
SYNE2-210ENST00000553455 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 EIF1AYO14602 144 aaKnown RBP8.66□□□□□ -1.02
SYNE2-210ENST00000553455 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 EGFRP00533 1210 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 EPB42P16452 691 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 KCNQ4P56696 695 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 PDE12Q6L8Q7 609 aaKnown RBP8.66□□□□□ -1.02
SYNE2-210ENST00000553455 RIPOR1Q6ZS17 1223 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 CCDC155Q8N6L0 562 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 SENP2Q9HC62 589 aa8.66□□□□□ -1.02
SYNE2-210ENST00000553455 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
SYNE2-210ENST00000553455 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-210ENST00000553455 LCE2BO14633 110 aa8.65□□□□□ -1.02
SYNE2-210ENST00000553455 MRPL58Q14197 206 aaKnown RBP8.65□□□□□ -1.02
SYNE2-210ENST00000553455 DBN1Q16643 649 aa8.65□□□□□ -1.02
SYNE2-210ENST00000553455 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
SYNE2-210ENST00000553455 TTC16Q8NEE8 873 aa8.65□□□□□ -1.02
SYNE2-210ENST00000553455 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
SYNE2-210ENST00000553455 NUCKS1Q9H1E3 243 aaKnown RBP8.65□□□□□ -1.02
SYNE2-210ENST00000553455 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
SYNE2-210ENST00000553455 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
SYNE2-210ENST00000553455 FNDC3AQ9Y2H6 1198 aaKnown RBP8.65□□□□□ -1.02
SYNE2-210ENST00000553455 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
SYNE2-210ENST00000553455 XYLBO75191 536 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 RECKO95980 971 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 SFSWAPQ12872 951 aaKnown RBP8.64□□□□□ -1.03
SYNE2-210ENST00000553455 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 DNAJC25Q9H1X3 360 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 ELP3Q9H9T3 547 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 PCDHGC4Q9Y5F7 938 aa8.64□□□□□ -1.03
SYNE2-210ENST00000553455 DCDC2BA2VCK2 349 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
SYNE2-210ENST00000553455 TNP2Q05952 138 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 USPL1Q5W0Q7 1092 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 TRIM22Q8IYM9 498 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 ZNF837Q96EG3 531 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-210ENST00000553455 FAM161BQ96MY7 647 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 STRN4Q9NRL3 753 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 KCNH4Q9UQ05 1017 aa8.63□□□□□ -1.03
SYNE2-210ENST00000553455 BNIP3LO60238 219 aa8.62□□□□□ -1.03
SYNE2-210ENST00000553455 CPNE3O75131 537 aaKnown RBP8.62□□□□□ -1.03
SYNE2-210ENST00000553455 NEFLP07196 543 aa8.62□□□□□ -1.03
SYNE2-210ENST00000553455 FGD1P98174 961 aa8.62□□□□□ -1.03
SYNE2-210ENST00000553455 GRIN2CQ14957 1233 aa8.62□□□□□ -1.03
SYNE2-210ENST00000553455 FBF1Q8TES7 1133 aa8.62□□□□□ -1.03
SYNE2-210ENST00000553455 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
SYNE2-210ENST00000553455 H7C1W4 665 aa8.61□□□□□ -1.03
SYNE2-210ENST00000553455 KHNYNO15037 678 aaKnown RBP8.61□□□□□ -1.03
SYNE2-210ENST00000553455 MAPTP10636 758 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms