RNA–Protein interactions for RNA: ENST00000553332.5

XRCC3-203, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-203ENST00000553332 NLRP10Q86W26 655 aa18.5■□□□□ 0.55
XRCC3-203ENST00000553332 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
XRCC3-203ENST00000553332 ADCY9O60503 1353 aa18.5■□□□□ 0.55
XRCC3-203ENST00000553332 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
XRCC3-203ENST00000553332 GOLGA2Q08379 1002 aa18.49■□□□□ 0.55
XRCC3-203ENST00000553332 C9orf131Q5VYM1 1079 aa18.49■□□□□ 0.55
XRCC3-203ENST00000553332 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
XRCC3-203ENST00000553332 RIC3Q7Z5B4 369 aa18.49■□□□□ 0.55
XRCC3-203ENST00000553332 ZNF526Q8TF50 670 aaPredicted RBP18.49■□□□□ 0.55
XRCC3-203ENST00000553332 CHMP4AQ9BY43 222 aa18.49■□□□□ 0.55
XRCC3-203ENST00000553332 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
XRCC3-203ENST00000553332 DIEXFQ68CQ4 756 aaKnown RBP18.48■□□□□ 0.55
XRCC3-203ENST00000553332 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
XRCC3-203ENST00000553332 RNF181Q9P0P0 153 aa18.47■□□□□ 0.55
XRCC3-203ENST00000553332 TRMT112Q9UI30 125 aaKnown RBP18.47■□□□□ 0.55
XRCC3-203ENST00000553332 FER1L6Q2WGJ9 1857 aa18.47■□□□□ 0.55
XRCC3-203ENST00000553332 LAMB2P55268 1798 aa18.46■□□□□ 0.55
XRCC3-203ENST00000553332 C3orf67Q6ZVT6 689 aa18.46■□□□□ 0.55
XRCC3-203ENST00000553332 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
XRCC3-203ENST00000553332 RPGRQ92834 1020 aaKnown RBP18.46■□□□□ 0.55
XRCC3-203ENST00000553332 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
XRCC3-203ENST00000553332 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
XRCC3-203ENST00000553332 RIC1Q4ADV7 1423 aa18.46■□□□□ 0.55
XRCC3-203ENST00000553332 NFKBIEO00221 500 aa18.45■□□□□ 0.54
XRCC3-203ENST00000553332 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
XRCC3-203ENST00000553332 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
XRCC3-203ENST00000553332 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
XRCC3-203ENST00000553332 VAMP4O75379 141 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 DDX58O95786 925 aaKnown RBP18.44■□□□□ 0.54
XRCC3-203ENST00000553332 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 HCLS1P14317 486 aaPredicted RBP18.44■□□□□ 0.54
XRCC3-203ENST00000553332 PRELPP51888 382 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 MYD88Q99836 296 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 GPBP1L1Q9HC44 474 aaPredicted RBP18.44■□□□□ 0.54
XRCC3-203ENST00000553332 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 RNF123Q5XPI4 1314 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
XRCC3-203ENST00000553332 OLFM4Q6UX06 510 aa18.43■□□□□ 0.54
XRCC3-203ENST00000553332 G2E3Q7L622 706 aa18.43■□□□□ 0.54
XRCC3-203ENST00000553332 MIER1Q8N108 512 aa18.43■□□□□ 0.54
XRCC3-203ENST00000553332 RBM17Q96I25 401 aaKnown RBP18.43■□□□□ 0.54
XRCC3-203ENST00000553332 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
XRCC3-203ENST00000553332 LMNB1P20700 586 aa18.42■□□□□ 0.54
XRCC3-203ENST00000553332 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
XRCC3-203ENST00000553332 SOGA3Q5TF21 947 aa18.42■□□□□ 0.54
XRCC3-203ENST00000553332 C7orf43Q8WVR3 580 aa18.42■□□□□ 0.54
XRCC3-203ENST00000553332 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
XRCC3-203ENST00000553332 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
XRCC3-203ENST00000553332 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
XRCC3-203ENST00000553332 PI4KAP2A4QPH2 592 aa18.41■□□□□ 0.54
XRCC3-203ENST00000553332 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-203ENST00000553332 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
XRCC3-203ENST00000553332 KSR2Q6VAB6 950 aa18.41■□□□□ 0.54
XRCC3-203ENST00000553332 PI4KAP1Q8N8J0 262 aa18.41■□□□□ 0.54
XRCC3-203ENST00000553332 DICER1Q9UPY3 1922 aaKnown RBP18.41■□□□□ 0.54
XRCC3-203ENST00000553332 TAF1P21675 1872 aa18.4■□□□□ 0.54
XRCC3-203ENST00000553332 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
XRCC3-203ENST00000553332 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
XRCC3-203ENST00000553332 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
XRCC3-203ENST00000553332 CRAMP1Q96RY5 1269 aa18.39■□□□□ 0.53
XRCC3-203ENST00000553332 FLIIQ13045 1269 aa18.38■□□□□ 0.53
XRCC3-203ENST00000553332 PPEF1O14829 653 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-203ENST00000553332 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-203ENST00000553332 SLC51AQ86UW1 340 aa18.37■□□□□ 0.53
XRCC3-203ENST00000553332 CCDC191Q8NCU4 936 aa18.37■□□□□ 0.53
XRCC3-203ENST00000553332 JARID2Q92833 1246 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-203ENST00000553332 CWC25Q9NXE8 425 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-203ENST00000553332 ABCC4O15439 1325 aa18.37■□□□□ 0.53
XRCC3-203ENST00000553332 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
XRCC3-203ENST00000553332 E9PSI1 815 aa18.36■□□□□ 0.53
XRCC3-203ENST00000553332 IRS4O14654 1257 aaPredicted RBP18.36■□□□□ 0.53
XRCC3-203ENST00000553332 NEXNQ0ZGT2 675 aa18.36■□□□□ 0.53
XRCC3-203ENST00000553332 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
XRCC3-203ENST00000553332 ZBTB38Q8NAP3 1195 aaPredicted RBP18.36■□□□□ 0.53
XRCC3-203ENST00000553332 IGKV5-2P06315 115 aa18.35■□□□□ 0.53
XRCC3-203ENST00000553332 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
XRCC3-203ENST00000553332 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
XRCC3-203ENST00000553332 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
XRCC3-203ENST00000553332 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
XRCC3-203ENST00000553332 PCCAP05165 728 aaPredicted RBP18.34■□□□□ 0.53
XRCC3-203ENST00000553332 CWF19L2Q2TBE0 894 aaKnown RBP18.34■□□□□ 0.53
XRCC3-203ENST00000553332 NMRK2Q9NPI5 230 aa18.34■□□□□ 0.53
XRCC3-203ENST00000553332 ZNF277Q9NRM2 450 aaPredicted RBP18.34■□□□□ 0.53
XRCC3-203ENST00000553332 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.53
XRCC3-203ENST00000553332 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
XRCC3-203ENST00000553332 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
XRCC3-203ENST00000553332 DNAAF4Q8WXU2 420 aa18.33■□□□□ 0.52
XRCC3-203ENST00000553332 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
XRCC3-203ENST00000553332 KIF3CO14782 793 aa18.32■□□□□ 0.52
XRCC3-203ENST00000553332 C1QTNF8P60827 252 aa18.32■□□□□ 0.52
XRCC3-203ENST00000553332 GRAPQ13588 217 aa18.32■□□□□ 0.52
XRCC3-203ENST00000553332 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
XRCC3-203ENST00000553332 GRAPLQ8TC17 118 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-203ENST00000553332 TMX4Q9H1E5 349 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-203ENST00000553332 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
XRCC3-203ENST00000553332 BBOX1O75936 387 aa18.31■□□□□ 0.52
XRCC3-203ENST00000553332 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
XRCC3-203ENST00000553332 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms