RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 PRR36Q9H6K5 1346 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 UNCXA6NJT0 531 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 RAB11FIP3O75154 756 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 KIF4AO95239 1232 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 DMTNQ08495 405 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 LMOD3Q0VAK6 560 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 TSR1Q2NL82 804 aaKnown RBP6.07□□□□□ -1.44
PFDN5-219ENST00000553171 UVSSAQ2YD98 709 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 PUS10Q3MIT2 529 aaKnown RBP6.07□□□□□ -1.44
PFDN5-219ENST00000553171 KANK4Q5T7N3 995 aaPredicted RBP6.07□□□□□ -1.44
PFDN5-219ENST00000553171 SLAIN1Q8ND83 568 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 ARHGEF10LQ9HCE6 1279 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 RNF181Q9P0P0 153 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 TSKSQ9UJT2 592 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 BCS1LQ9Y276 419 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 COMMD10Q9Y6G5 202 aa6.07□□□□□ -1.44
PFDN5-219ENST00000553171 PIEZO1Q92508 2521 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 RPGRIP1LQ68CZ1 1315 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 PKD1L3Q7Z443 1732 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 A6NJR5 290 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 CA12O43570 354 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 LETM1O95202 739 aaPredicted RBP6.06□□□□□ -1.44
PFDN5-219ENST00000553171 MAP4K4O95819 1239 aaPredicted RBP6.06□□□□□ -1.44
PFDN5-219ENST00000553171 NEFHP12036 1026 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 CREBRFQ8IUR6 639 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 SREK1Q8WXA9 508 aaKnown RBP6.06□□□□□ -1.44
PFDN5-219ENST00000553171 ITFG2Q969R8 447 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 DDRGK1Q96HY6 314 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
PFDN5-219ENST00000553171 SPATA31E1Q6ZUB1 1445 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 LRRC37A3O60309 1634 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 TUBGCP6Q96RT7 1819 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 ANKRD30BQ9BXX2 1392 aa6.06□□□□□ -1.44
PFDN5-219ENST00000553171 PEX19P40855 299 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 ZC3H6P61129 1189 aaKnown RBP6.05□□□□□ -1.44
PFDN5-219ENST00000553171 CDC37Q16543 378 aaPredicted RBP6.05□□□□□ -1.44
PFDN5-219ENST00000553171 RPAINQ86UA6 219 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 AMOTL1Q8IY63 956 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 LSM14AQ8ND56 463 aaKnown RBP6.05□□□□□ -1.44
PFDN5-219ENST00000553171 CCDC97Q96F63 343 aaPredicted RBP6.05□□□□□ -1.44
PFDN5-219ENST00000553171 NBPF3Q9H094 633 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 TSPYL1Q9H0U9 437 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 ANAPC4Q9UJX5 808 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 CRYBG1Q9Y4K1 1723 aa6.05□□□□□ -1.44
PFDN5-219ENST00000553171 SYNRGQ9UMZ2 1314 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 IQGAP3Q86VI3 1631 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 FAM200BP0CF97 657 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 TCF3P15923 654 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 PAX3P23760 479 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 TGFB2P61812 414 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 HDGFL1Q5TGJ6 251 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 NGEFQ8N5V2 710 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 MARVELD3Q96A59 401 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 KIF12Q96FN5 646 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 CDCA7Q9BWT1 371 aaPredicted RBP6.04□□□□□ -1.44
PFDN5-219ENST00000553171 CCDC61Q9Y6R9 512 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 ALS2Q96Q42 1657 aa6.04□□□□□ -1.44
PFDN5-219ENST00000553171 TTC28Q96AY4 2481 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 CRB1P82279 1406 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 STK10O94804 968 aaKnown RBP6.03□□□□□ -1.44
PFDN5-219ENST00000553171 SEC24BO95487 1268 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 FOSBP53539 338 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 RGL3Q3MIN7 710 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 GJC2Q5T442 439 aaPredicted RBP6.03□□□□□ -1.44
PFDN5-219ENST00000553171 ATL2Q8NHH9 583 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 TMEM121BQ9BXQ6 578 aaPredicted RBP6.03□□□□□ -1.44
PFDN5-219ENST00000553171 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 TMX4Q9H1E5 349 aaPredicted RBP6.03□□□□□ -1.44
PFDN5-219ENST00000553171 PNNQ9H307 717 aaKnown RBP6.03□□□□□ -1.44
PFDN5-219ENST00000553171 SUDS3Q9H7L9 328 aaPredicted RBP6.03□□□□□ -1.44
PFDN5-219ENST00000553171 RRP7BPQ9NSQ0 103 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 CEP83Q9Y592 693 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 CEP290O15078 2479 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 THSD7BQ9C0I4 1608 aa6.03□□□□□ -1.44
PFDN5-219ENST00000553171 LTBP1Q14766 1721 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 TRPM3Q9HCF6 1732 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 ERBB3P21860 1342 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 USP6P35125 1406 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 FCHSD2O94868 740 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 ITGBL1O95965 494 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 TIE1P35590 1138 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 NEXNQ0ZGT2 675 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 DNAJC14Q6Y2X3 702 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 PROCA1Q8NCQ7 364 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 RNF217Q8TC41 542 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 PNISRQ8TF01 805 aaKnown RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 GPR101Q96P66 508 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 RAPGEFL1Q9UHV5 662 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 TPX2Q9ULW0 747 aaKnown RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 SMC3Q9UQE7 1217 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 ARIH1Q9Y4X5 557 aaPredicted RBP6.02□□□□□ -1.45
PFDN5-219ENST00000553171 COL18A1P39060 1754 aa6.02□□□□□ -1.45
PFDN5-219ENST00000553171 NHSQ6T4R5 1651 aa6.01□□□□□ -1.45
PFDN5-219ENST00000553171 TTLL13PA6NNM8 815 aa6.01□□□□□ -1.45
PFDN5-219ENST00000553171 IPO8O15397 1037 aaKnown RBP6.01□□□□□ -1.45
PFDN5-219ENST00000553171 MAP2K2P36507 400 aa6.01□□□□□ -1.45
PFDN5-219ENST00000553171 PSMC1P62191 440 aaKnown RBP6.01□□□□□ -1.45
PFDN5-219ENST00000553171 HSP90AB2PQ58FF8 381 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms