RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
PRKCH-203ENST00000552875 TEX13AQ9BXU3 409 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-203ENST00000552875 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
PRKCH-203ENST00000552875 A0A0C4DFX4 3053 aa12.04□□□□□ -0.48
PRKCH-203ENST00000552875 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
PRKCH-203ENST00000552875 VPS33BQ9H267 617 aa12.04□□□□□ -0.48
PRKCH-203ENST00000552875 POTEFA5A3E0 1075 aa12.03□□□□□ -0.48
PRKCH-203ENST00000552875 H7C1D1 291 aa12.03□□□□□ -0.48
PRKCH-203ENST00000552875 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
PRKCH-203ENST00000552875 GMPSP49915 693 aaPredicted RBP12.03□□□□□ -0.48
PRKCH-203ENST00000552875 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
PRKCH-203ENST00000552875 KRT26Q7Z3Y9 468 aa12.03□□□□□ -0.48
PRKCH-203ENST00000552875 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
PRKCH-203ENST00000552875 MKI67P46013 3256 aaKnown RBP12.02□□□□□ -0.48
PRKCH-203ENST00000552875 GPR25O00155 361 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 FKTNO75072 461 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 TBC1D8O95759 1140 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
PRKCH-203ENST00000552875 TNIP1Q15025 636 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 CLEC4GQ6UXB4 293 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 ZNRF3Q9ULT6 936 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 NPC1L1Q9UHC9 1359 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 CACNA1SQ13698 1873 aa12.02□□□□□ -0.49
PRKCH-203ENST00000552875 CUL9Q8IWT3 2517 aa12.01□□□□□ -0.49
PRKCH-203ENST00000552875 CAMTA2O94983 1202 aa12.01□□□□□ -0.49
PRKCH-203ENST00000552875 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
PRKCH-203ENST00000552875 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
PRKCH-203ENST00000552875 AKAP11Q9UKA4 1901 aa12□□□□□ -0.49
PRKCH-203ENST00000552875 HIRAP54198 1017 aaPredicted RBP12□□□□□ -0.49
PRKCH-203ENST00000552875 CXCL9Q07325 125 aa12□□□□□ -0.49
PRKCH-203ENST00000552875 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
PRKCH-203ENST00000552875 OTUD5Q96G74 571 aa12□□□□□ -0.49
PRKCH-203ENST00000552875 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
PRKCH-203ENST00000552875 SZT2Q5T011 3432 aa11.99□□□□□ -0.49
PRKCH-203ENST00000552875 H0YGN5 161 aa11.99□□□□□ -0.49
PRKCH-203ENST00000552875 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
PRKCH-203ENST00000552875 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
PRKCH-203ENST00000552875 SUPT20HQ8NEM7 779 aa11.99□□□□□ -0.49
PRKCH-203ENST00000552875 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
PRKCH-203ENST00000552875 TESK2Q96S53 571 aa11.99□□□□□ -0.49
PRKCH-203ENST00000552875 CNOT7Q9UIV1 285 aaKnown RBP11.99□□□□□ -0.49
PRKCH-203ENST00000552875 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
PRKCH-203ENST00000552875 SNED1Q8TER0 1413 aa11.98□□□□□ -0.49
PRKCH-203ENST00000552875 RASAL3Q86YV0 1011 aa11.98□□□□□ -0.49
PRKCH-203ENST00000552875 TRPM4Q8TD43 1214 aa11.98□□□□□ -0.49
PRKCH-203ENST00000552875 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
PRKCH-203ENST00000552875 TNNT2P45379 298 aaPredicted RBP11.97□□□□□ -0.49
PRKCH-203ENST00000552875 FKBP1BP68106 108 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 AOC3Q16853 763 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 TRIM17Q9Y577 477 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 SCN11AQ9UI33 1791 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 COL4A5P29400 1685 aa11.97□□□□□ -0.49
PRKCH-203ENST00000552875 MICALL2Q8IY33 904 aa11.96□□□□□ -0.49
PRKCH-203ENST00000552875 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
PRKCH-203ENST00000552875 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
PRKCH-203ENST00000552875 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
PRKCH-203ENST00000552875 RGL2O15211 777 aa11.95□□□□□ -0.5
PRKCH-203ENST00000552875 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
PRKCH-203ENST00000552875 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
PRKCH-203ENST00000552875 CRY2Q49AN0 593 aa11.95□□□□□ -0.5
PRKCH-203ENST00000552875 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
PRKCH-203ENST00000552875 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
PRKCH-203ENST00000552875 ADM5C9JUS6 153 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 TM4SF4P48230 202 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 SULT6B1Q6IMI4 303 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 DPF2Q92785 391 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 RBM17Q96I25 401 aaKnown RBP11.94□□□□□ -0.5
PRKCH-203ENST00000552875 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 MRC1P22897 1456 aa11.94□□□□□ -0.5
PRKCH-203ENST00000552875 TRIOBPQ9H2D6 2365 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 FAM177BA6PVY3 158 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 RAD17O75943 681 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 HOXA10P31260 410 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-203ENST00000552875 DLK2Q6UY11 383 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 OTOP1Q7RTM1 612 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
PRKCH-203ENST00000552875 COL25A1Q9BXS0 654 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-203ENST00000552875 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
PRKCH-203ENST00000552875 COL6A3P12111 3177 aa11.92□□□□□ -0.5
PRKCH-203ENST00000552875 A0A1W2PPC1 479 aa11.92□□□□□ -0.5
PRKCH-203ENST00000552875 TCERG1O14776 1098 aaKnown RBP11.92□□□□□ -0.5
PRKCH-203ENST00000552875 NBPF11Q86T75 865 aa11.92□□□□□ -0.5
PRKCH-203ENST00000552875 CRAMP1Q96RY5 1269 aa11.92□□□□□ -0.5
PRKCH-203ENST00000552875 A1BGP04217 495 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 TBC1D10BQ4KMP7 808 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-203ENST00000552875 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 DPF3Q92784 378 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 CDCA5Q96FF9 252 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 ZNF496Q96IT1 587 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-203ENST00000552875 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms