RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
TMEM116-217ENST00000552801 TMX4Q9H1E5 349 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-217ENST00000552801 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
TMEM116-217ENST00000552801 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-217ENST00000552801 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
TMEM116-217ENST00000552801 ALDH1B1P30837 517 aa11.48□□□□□ -0.57
TMEM116-217ENST00000552801 DCTN1Q14203 1278 aa11.48□□□□□ -0.57
TMEM116-217ENST00000552801 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
TMEM116-217ENST00000552801 NYXQ9GZU5 481 aa11.48□□□□□ -0.57
TMEM116-217ENST00000552801 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
TMEM116-217ENST00000552801 SLX4Q8IY92 1834 aa11.47□□□□□ -0.57
TMEM116-217ENST00000552801 JMYQ8N9B5 988 aa11.47□□□□□ -0.57
TMEM116-217ENST00000552801 ARFGEF2Q9Y6D5 1785 aa11.46□□□□□ -0.57
TMEM116-217ENST00000552801 PRAMEF22A3QJZ6 481 aa11.46□□□□□ -0.57
TMEM116-217ENST00000552801 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-217ENST00000552801 DDNO94850 711 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-217ENST00000552801 PRELPP51888 382 aa11.46□□□□□ -0.57
TMEM116-217ENST00000552801 EAPPQ56P03 285 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-217ENST00000552801 TNS4Q8IZW8 715 aa11.46□□□□□ -0.57
TMEM116-217ENST00000552801 RPGRQ92834 1020 aaKnown RBP11.46□□□□□ -0.57
TMEM116-217ENST00000552801 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
TMEM116-217ENST00000552801 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
TMEM116-217ENST00000552801 RGL2O15211 777 aa11.45□□□□□ -0.58
TMEM116-217ENST00000552801 FKBP4Q02790 459 aaKnown RBP eCLIP11.45□□□□□ -0.58
TMEM116-217ENST00000552801 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
TMEM116-217ENST00000552801 MIS18AQ9NYP9 233 aa11.45□□□□□ -0.58
TMEM116-217ENST00000552801 LAMB4A4D0S4 1761 aa11.45□□□□□ -0.58
TMEM116-217ENST00000552801 MYL6BP14649 208 aa11.44□□□□□ -0.58
TMEM116-217ENST00000552801 ZNF277Q9NRM2 450 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-217ENST00000552801 SCN4AP35499 1836 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
TMEM116-217ENST00000552801 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
TMEM116-217ENST00000552801 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
TMEM116-217ENST00000552801 NBPF10Q6P3W6 841 aaKnown RBP11.43□□□□□ -0.58
TMEM116-217ENST00000552801 LDHDQ86WU2 507 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 AIDAQ96BJ3 306 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 HACL1Q9UJ83 578 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 DLG5Q8TDM6 1919 aa11.43□□□□□ -0.58
TMEM116-217ENST00000552801 ERVV-1B6SEH8 477 aa11.42□□□□□ -0.58
TMEM116-217ENST00000552801 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-217ENST00000552801 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
TMEM116-217ENST00000552801 NFE2L2Q16236 605 aa11.42□□□□□ -0.58
TMEM116-217ENST00000552801 COL13A1Q5TAT6 717 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-217ENST00000552801 CC2D2BQ6DHV5 1058 aa11.42□□□□□ -0.58
TMEM116-217ENST00000552801 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
TMEM116-217ENST00000552801 MKRN1Q9UHC7 482 aaKnown RBP11.42□□□□□ -0.58
TMEM116-217ENST00000552801 GPTP24298 496 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 HLFQ16534 295 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 PPP1R42Q7Z4L9 355 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-217ENST00000552801 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
TMEM116-217ENST00000552801 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 TSPYL4Q9UJ04 414 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 MAP3K15Q6ZN16 1313 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 NUP98P52948 1817 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 POTECB2RU33 542 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-217ENST00000552801 EPHX2P34913 555 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 IFNL1Q8IU54 200 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 TAF1DQ9H5J8 278 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-217ENST00000552801 GJA3Q9Y6H8 435 aa11.41□□□□□ -0.58
TMEM116-217ENST00000552801 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.59
TMEM116-217ENST00000552801 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.59
TMEM116-217ENST00000552801 TCERG1O14776 1098 aaKnown RBP11.4□□□□□ -0.59
TMEM116-217ENST00000552801 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.59
TMEM116-217ENST00000552801 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.59
TMEM116-217ENST00000552801 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.59
TMEM116-217ENST00000552801 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 EIF4A1P60842 406 aaKnown RBP11.39□□□□□ -0.59
TMEM116-217ENST00000552801 PARP10Q53GL7 1025 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 ZNF467Q7Z7K2 595 aaPredicted RBP11.39□□□□□ -0.59
TMEM116-217ENST00000552801 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 GPC2Q8N158 579 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 THUMPD2Q9BTF0 503 aaKnown RBP11.39□□□□□ -0.59
TMEM116-217ENST00000552801 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
TMEM116-217ENST00000552801 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-217ENST00000552801 RIPK4P57078 832 aa11.38□□□□□ -0.59
TMEM116-217ENST00000552801 TTLL7Q6ZT98 887 aa11.38□□□□□ -0.59
TMEM116-217ENST00000552801 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-217ENST00000552801 PSMD1Q99460 953 aa11.38□□□□□ -0.59
TMEM116-217ENST00000552801 ABT1Q9ULW3 272 aaKnown RBP11.38□□□□□ -0.59
TMEM116-217ENST00000552801 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
TMEM116-217ENST00000552801 SUPT20HQ8NEM7 779 aa11.37□□□□□ -0.59
TMEM116-217ENST00000552801 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
TMEM116-217ENST00000552801 ABCC12Q96J65 1359 aa11.37□□□□□ -0.59
TMEM116-217ENST00000552801 IBTKQ9P2D0 1353 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 782.2 ms