RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
PFDN5-218ENST00000552742 DLEC1Q9Y238 1755 aa12.62□□□□□ -0.39
PFDN5-218ENST00000552742 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-218ENST00000552742 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
PFDN5-218ENST00000552742 TRMT112Q9UI30 125 aaKnown RBP12.62□□□□□ -0.39
PFDN5-218ENST00000552742 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-218ENST00000552742 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 SLX4Q8IY92 1834 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 DDX58O95786 925 aaKnown RBP12.61□□□□□ -0.39
PFDN5-218ENST00000552742 TRIM28Q13263 835 aaKnown RBP12.61□□□□□ -0.39
PFDN5-218ENST00000552742 SLC10A5Q5PT55 438 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 STYK1Q6J9G0 422 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
PFDN5-218ENST00000552742 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 MASTLQ96GX5 879 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 MYD88Q99836 296 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
PFDN5-218ENST00000552742 MAP3K2Q9Y2U5 619 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
PFDN5-218ENST00000552742 ABCC12Q96J65 1359 aa12.6□□□□□ -0.39
PFDN5-218ENST00000552742 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-218ENST00000552742 NPR1P16066 1061 aa12.6□□□□□ -0.39
PFDN5-218ENST00000552742 METTL22Q9BUU2 404 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-218ENST00000552742 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-218ENST00000552742 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
PFDN5-218ENST00000552742 FLIIQ13045 1269 aa12.59□□□□□ -0.39
PFDN5-218ENST00000552742 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-218ENST00000552742 CNKSR1Q969H4 720 aa12.59□□□□□ -0.39
PFDN5-218ENST00000552742 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
PFDN5-218ENST00000552742 ADCY9O60503 1353 aa12.58□□□□□ -0.4
PFDN5-218ENST00000552742 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
PFDN5-218ENST00000552742 C21orf2O43822 256 aa12.58□□□□□ -0.4
PFDN5-218ENST00000552742 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
PFDN5-218ENST00000552742 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-218ENST00000552742 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
PFDN5-218ENST00000552742 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
PFDN5-218ENST00000552742 SBF1O95248 1867 aa12.57□□□□□ -0.4
PFDN5-218ENST00000552742 IGKV5-2P06315 115 aa12.57□□□□□ -0.4
PFDN5-218ENST00000552742 HOXA10P31260 410 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-218ENST00000552742 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-218ENST00000552742 CRY2Q49AN0 593 aa12.57□□□□□ -0.4
PFDN5-218ENST00000552742 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
PFDN5-218ENST00000552742 TAF1P21675 1872 aa12.57□□□□□ -0.4
PFDN5-218ENST00000552742 LAMB2P55268 1798 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 F6X3S4 739 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 ALDH1B1P30837 517 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 RPGRQ92834 1020 aaKnown RBP12.56□□□□□ -0.4
PFDN5-218ENST00000552742 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-218ENST00000552742 RNF123Q5XPI4 1314 aa12.56□□□□□ -0.4
PFDN5-218ENST00000552742 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
PFDN5-218ENST00000552742 NEXNQ0ZGT2 675 aa12.55□□□□□ -0.4
PFDN5-218ENST00000552742 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
PFDN5-218ENST00000552742 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
PFDN5-218ENST00000552742 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
PFDN5-218ENST00000552742 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
PFDN5-218ENST00000552742 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
PFDN5-218ENST00000552742 CRAMP1Q96RY5 1269 aa12.55□□□□□ -0.4
PFDN5-218ENST00000552742 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
PFDN5-218ENST00000552742 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
PFDN5-218ENST00000552742 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-218ENST00000552742 PRELPP51888 382 aa12.54□□□□□ -0.4
PFDN5-218ENST00000552742 RASSF7Q02833 373 aa12.54□□□□□ -0.4
PFDN5-218ENST00000552742 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
PFDN5-218ENST00000552742 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-218ENST00000552742 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
PFDN5-218ENST00000552742 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
PFDN5-218ENST00000552742 NFKBIEO00221 500 aa12.53□□□□□ -0.4
PFDN5-218ENST00000552742 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-218ENST00000552742 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
PFDN5-218ENST00000552742 GCKRQ14397 625 aa12.52□□□□□ -0.41
PFDN5-218ENST00000552742 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
PFDN5-218ENST00000552742 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
PFDN5-218ENST00000552742 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
PFDN5-218ENST00000552742 LINS1Q8NG48 757 aa12.52□□□□□ -0.41
PFDN5-218ENST00000552742 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
PFDN5-218ENST00000552742 H7C1W4 665 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 BBOX1O75936 387 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 LMNB1P20700 586 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 ALDH1L2Q3SY69 923 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 BEND3Q5T5X7 828 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 SLC4A10Q6U841 1118 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 ABCC4O15439 1325 aa12.51□□□□□ -0.41
PFDN5-218ENST00000552742 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-218ENST00000552742 PDE8AO60658 829 aa12.5□□□□□ -0.41
PFDN5-218ENST00000552742 CT47B1P0C2W7 299 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-218ENST00000552742 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
PFDN5-218ENST00000552742 UBE3BQ7Z3V4 1068 aa12.5□□□□□ -0.41
PFDN5-218ENST00000552742 ZNF526Q8TF50 670 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-218ENST00000552742 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
PFDN5-218ENST00000552742 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
PFDN5-218ENST00000552742 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
PFDN5-218ENST00000552742 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
PFDN5-218ENST00000552742 GRAPQ13588 217 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms