RNA–Protein interactions for RNA: ENST00000552583.1

ITGA5-212, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-212ENST00000552583 ANKRD13DQ6ZTN6 518 aa18.34■□□□□ 0.53
ITGA5-212ENST00000552583 UTP14AQ9BVJ6 771 aaKnown RBP18.34■□□□□ 0.53
ITGA5-212ENST00000552583 LAMB2P55268 1798 aa18.34■□□□□ 0.53
ITGA5-212ENST00000552583 NFKBIEO00221 500 aa18.33■□□□□ 0.52
ITGA5-212ENST00000552583 C21orf2O43822 256 aa18.33■□□□□ 0.52
ITGA5-212ENST00000552583 GOLGA2Q08379 1002 aa18.33■□□□□ 0.52
ITGA5-212ENST00000552583 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.52
ITGA5-212ENST00000552583 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
ITGA5-212ENST00000552583 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
ITGA5-212ENST00000552583 RASSF7Q02833 373 aa18.32■□□□□ 0.52
ITGA5-212ENST00000552583 CCDC93Q567U6 631 aa18.32■□□□□ 0.52
ITGA5-212ENST00000552583 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
ITGA5-212ENST00000552583 MIER1Q8N108 512 aa18.32■□□□□ 0.52
ITGA5-212ENST00000552583 RPGRQ92834 1020 aaKnown RBP18.32■□□□□ 0.52
ITGA5-212ENST00000552583 TAOK3Q9H2K8 898 aa18.32■□□□□ 0.52
ITGA5-212ENST00000552583 KDM2BQ8NHM5 1336 aa18.31■□□□□ 0.52
ITGA5-212ENST00000552583 SLC10A5Q5PT55 438 aa18.31■□□□□ 0.52
ITGA5-212ENST00000552583 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
ITGA5-212ENST00000552583 SH3TC1Q8TE82 1336 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 DDX58O95786 925 aaKnown RBP18.3■□□□□ 0.52
ITGA5-212ENST00000552583 C1QTNF8P60827 252 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
ITGA5-212ENST00000552583 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 STK31Q9BXU1 1019 aa18.3■□□□□ 0.52
ITGA5-212ENST00000552583 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
ITGA5-212ENST00000552583 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
ITGA5-212ENST00000552583 TRIM28Q13263 835 aaKnown RBP18.29■□□□□ 0.52
ITGA5-212ENST00000552583 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
ITGA5-212ENST00000552583 RTKN2Q8IZC4 609 aa18.29■□□□□ 0.52
ITGA5-212ENST00000552583 ZNF526Q8TF50 670 aaPredicted RBP18.29■□□□□ 0.52
ITGA5-212ENST00000552583 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
ITGA5-212ENST00000552583 ISCA1Q9BUE6 129 aa18.29■□□□□ 0.52
ITGA5-212ENST00000552583 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
ITGA5-212ENST00000552583 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
ITGA5-212ENST00000552583 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
ITGA5-212ENST00000552583 SNED1Q8TER0 1413 aa18.27■□□□□ 0.52
ITGA5-212ENST00000552583 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
ITGA5-212ENST00000552583 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
ITGA5-212ENST00000552583 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
ITGA5-212ENST00000552583 FKBP4Q02790 459 aaKnown RBP eCLIP18.26■□□□□ 0.51
ITGA5-212ENST00000552583 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
ITGA5-212ENST00000552583 KIF3CO14782 793 aa18.25■□□□□ 0.51
ITGA5-212ENST00000552583 PRELPP51888 382 aa18.25■□□□□ 0.51
ITGA5-212ENST00000552583 PHAXQ9H814 394 aaKnown RBP18.25■□□□□ 0.51
ITGA5-212ENST00000552583 WDR90Q96KV7 1748 aa18.24■□□□□ 0.51
ITGA5-212ENST00000552583 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
ITGA5-212ENST00000552583 PSMD1Q99460 953 aa18.24■□□□□ 0.51
ITGA5-212ENST00000552583 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
ITGA5-212ENST00000552583 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
ITGA5-212ENST00000552583 GLTPD2A6NH11 291 aa18.23■□□□□ 0.51
ITGA5-212ENST00000552583 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
ITGA5-212ENST00000552583 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
ITGA5-212ENST00000552583 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
ITGA5-212ENST00000552583 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
ITGA5-212ENST00000552583 ATP5J2-PTCD1G3V325 749 aa18.22■□□□□ 0.51
ITGA5-212ENST00000552583 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
ITGA5-212ENST00000552583 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
ITGA5-212ENST00000552583 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
ITGA5-212ENST00000552583 ABCC4O15439 1325 aa18.22■□□□□ 0.51
ITGA5-212ENST00000552583 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
ITGA5-212ENST00000552583 KSR2Q6VAB6 950 aa18.21■□□□□ 0.51
ITGA5-212ENST00000552583 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
ITGA5-212ENST00000552583 ZBTB38Q8NAP3 1195 aaPredicted RBP18.21■□□□□ 0.51
ITGA5-212ENST00000552583 NMRK2Q9NPI5 230 aa18.21■□□□□ 0.51
ITGA5-212ENST00000552583 MYH3P11055 1940 aa18.2■□□□□ 0.5
ITGA5-212ENST00000552583 BBOX1O75936 387 aa18.2■□□□□ 0.5
ITGA5-212ENST00000552583 TOMM70O94826 608 aa18.2■□□□□ 0.5
ITGA5-212ENST00000552583 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
ITGA5-212ENST00000552583 NEXNQ0ZGT2 675 aa18.2■□□□□ 0.5
ITGA5-212ENST00000552583 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
ITGA5-212ENST00000552583 MYD88Q99836 296 aa18.2■□□□□ 0.5
ITGA5-212ENST00000552583 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
ITGA5-212ENST00000552583 ATP6V0A2Q9Y487 856 aa18.2■□□□□ 0.5
ITGA5-212ENST00000552583 VAMP4O75379 141 aa18.19■□□□□ 0.5
ITGA5-212ENST00000552583 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
ITGA5-212ENST00000552583 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
ITGA5-212ENST00000552583 GRAPQ13588 217 aa18.19■□□□□ 0.5
ITGA5-212ENST00000552583 C16orf71Q8IYS4 520 aaPredicted RBP18.19■□□□□ 0.5
ITGA5-212ENST00000552583 GRAPLQ8TC17 118 aaPredicted RBP18.19■□□□□ 0.5
ITGA5-212ENST00000552583 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
ITGA5-212ENST00000552583 MAP3K2Q9Y2U5 619 aa18.19■□□□□ 0.5
ITGA5-212ENST00000552583 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
ITGA5-212ENST00000552583 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
ITGA5-212ENST00000552583 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
ITGA5-212ENST00000552583 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
ITGA5-212ENST00000552583 FLIIQ13045 1269 aa18.18■□□□□ 0.5
ITGA5-212ENST00000552583 SYNE4Q8N205 404 aa18.18■□□□□ 0.5
ITGA5-212ENST00000552583 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
ITGA5-212ENST00000552583 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
ITGA5-212ENST00000552583 VPS33BQ9H267 617 aa18.18■□□□□ 0.5
ITGA5-212ENST00000552583 SCN4AP35499 1836 aa18.18■□□□□ 0.5
ITGA5-212ENST00000552583 VEGFAP15692 232 aaPredicted RBP18.17■□□□□ 0.5
ITGA5-212ENST00000552583 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
ITGA5-212ENST00000552583 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
ITGA5-212ENST00000552583 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms