RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 ZBTB47Q9UFB7 747 aaPredicted RBP5.95□□□□□ -1.46
TMEM106C-220ENST00000552561 PCDHB13Q9Y5F0 798 aa5.95□□□□□ -1.46
TMEM106C-220ENST00000552561 IBTKQ9P2D0 1353 aaPredicted RBP5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 LAMB4A4D0S4 1761 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 KDM3BQ7LBC6 1761 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 POTECB2RU33 542 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 H0YIN7 160 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 SNRPA1P09661 255 aaKnown RBP5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 PPP2R1AP30153 589 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 PRKAR2BP31323 418 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 NUBP1P53384 320 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 SOGA3Q5TF21 947 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 TBC1D9BQ66K14 1250 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 STYK1Q6J9G0 422 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 L3MBTL3Q96JM7 780 aaPredicted RBP5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 CFAP53Q96M91 514 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 TRIM35Q9UPQ4 493 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 COLQQ9Y215 455 aaPredicted RBP5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 NUDCQ9Y266 331 aa5.94□□□□□ -1.46
TMEM106C-220ENST00000552561 SCN4AP35499 1836 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 TMEM88BA6NKF7 163 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 CA12O43570 354 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 SEC24BO95487 1268 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 ECE1P42892 770 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 CRY2Q49AN0 593 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 CC2D1BQ5T0F9 858 aaKnown RBP5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 PAXIP1Q6ZW49 1069 aaPredicted RBP5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 CNKSR1Q969H4 720 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 PLEKHF1Q96S99 279 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 BABAM1Q9NWV8 329 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 USP16Q9Y5T5 823 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 ERBB4Q15303 1308 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 ADAMTSL1Q8N6G6 1762 aa5.93□□□□□ -1.46
TMEM106C-220ENST00000552561 SLX4Q8IY92 1834 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 CCDC88AQ3V6T2 1871 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 BTBD11A6QL63 1104 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 NBPF26B4DH59 902 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 ERVV-1B6SEH8 477 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 DLL1O00548 723 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 A1BGP04217 495 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 CANXP27824 592 aaKnown RBP5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 VEGFBP49765 207 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 IER5LQ5T953 404 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 NBPF10Q6P3W6 841 aaKnown RBP5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 C2CD5Q86YS7 1000 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 PNISRQ8TF01 805 aaKnown RBP5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 MASTLQ96GX5 879 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 SETDB2Q96T68 719 aa5.92□□□□□ -1.46
TMEM106C-220ENST00000552561 IQCA1LA6NCM1 817 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 U2SURPO15042 1029 aaKnown RBP5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 KCNQ3O43525 872 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 HOXA10P31260 410 aaPredicted RBP5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 RASSF7Q02833 373 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 DGKZQ13574 1117 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 TAF7Q15545 349 aaPredicted RBP5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 GRIPAP1Q4V328 841 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 CC2D2BQ6DHV5 1058 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 LRP10Q7Z4F1 713 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 DZIP3Q86Y13 1208 aaKnown RBP5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 IFNL1Q8IU54 200 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 CNBD1Q8NA66 436 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 MCOLN1Q9GZU1 580 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 TAOK3Q9H2K8 898 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 ABT1Q9ULW3 272 aaKnown RBP5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 TBC1D2BQ9UPU7 963 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 ZNF652Q9Y2D9 606 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 RNF123Q5XPI4 1314 aa5.91□□□□□ -1.46
TMEM106C-220ENST00000552561 DLG5Q8TDM6 1919 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 CASP8AP2Q9UKL3 1982 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 THSD7BQ9C0I4 1608 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 U2AF1L5P0DN76 240 aaPredicted RBP5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 NPR1P16066 1061 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 EIF4A1P60842 406 aaKnown RBP5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 ST5P78524 1137 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 U2AF1Q01081 240 aaKnown RBP eCLIP5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 DEFB115Q30KQ5 88 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 PRPF40BQ6NWY9 871 aaKnown RBP5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 TPTE2Q6XPS3 522 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 FAM212AQ96EL1 285 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 PSMD1Q99460 953 aa5.9□□□□□ -1.46
TMEM106C-220ENST00000552561 PASKQ96RG2 1323 aa5.9□□□□□ -1.47
TMEM106C-220ENST00000552561 NUP98P52948 1817 aa5.9□□□□□ -1.47
TMEM106C-220ENST00000552561 PRAMEF22A3QJZ6 481 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 FZD9O00144 591 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 C21orf2O43822 256 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 ALDH1B1P30837 517 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 SOX10P56693 466 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 FKBP4Q02790 459 aaKnown RBP eCLIP5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 CCDC93Q567U6 631 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 MCM10Q7L590 875 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 LDHDQ86WU2 507 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 RTKN2Q8IZC4 609 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 RTF1Q92541 710 aaKnown RBP5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 VPS33BQ9H267 617 aa5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 PNNQ9H307 717 aaKnown RBP5.89□□□□□ -1.47
TMEM106C-220ENST00000552561 GRM1Q13255 1194 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 NFE2L2Q16236 605 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 SLC10A5Q5PT55 438 aa5.88□□□□□ -1.47
TMEM106C-220ENST00000552561 GIGYF2Q6Y7W6 1299 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms