RNA–Protein interactions for RNA: ENST00000552540.5

NACA-221, Transcript of nascent polypeptide associated complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NACA, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NACA-221ENST00000552540 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
NACA-221ENST00000552540 TRMT112Q9UI30 125 aaKnown RBP18■□□□□ 0.47
NACA-221ENST00000552540 ANKRD31Q8N7Z5 1873 aa18■□□□□ 0.47
NACA-221ENST00000552540 F6X3S4 739 aa17.99■□□□□ 0.47
NACA-221ENST00000552540 H0YIN7 160 aa17.99■□□□□ 0.47
NACA-221ENST00000552540 PDE6BP35913 854 aa17.99■□□□□ 0.47
NACA-221ENST00000552540 RTL5Q5HYW3 569 aaPredicted RBP17.99■□□□□ 0.47
NACA-221ENST00000552540 CT47B1P0C2W7 299 aaPredicted RBP17.98■□□□□ 0.47
NACA-221ENST00000552540 KCNA3P22001 575 aa17.98■□□□□ 0.47
NACA-221ENST00000552540 NEXNQ0ZGT2 675 aa17.98■□□□□ 0.47
NACA-221ENST00000552540 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
NACA-221ENST00000552540 SYNE4Q8N205 404 aa17.98■□□□□ 0.47
NACA-221ENST00000552540 ABCC12Q96J65 1359 aa17.98■□□□□ 0.47
NACA-221ENST00000552540 DNAAF4Q8WXU2 420 aa17.97■□□□□ 0.47
NACA-221ENST00000552540 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
NACA-221ENST00000552540 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
NACA-221ENST00000552540 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
NACA-221ENST00000552540 IBTKQ9P2D0 1353 aaPredicted RBP17.96■□□□□ 0.47
NACA-221ENST00000552540 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.472e-40■□□□□ 11.3
NACA-221ENST00000552540 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
NACA-221ENST00000552540 JARID2Q92833 1246 aaPredicted RBP17.96■□□□□ 0.47
NACA-221ENST00000552540 FAM89AQ96GI7 184 aa17.96■□□□□ 0.47
NACA-221ENST00000552540 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
NACA-221ENST00000552540 HCLS1P14317 486 aaPredicted RBP17.95■□□□□ 0.46
NACA-221ENST00000552540 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
NACA-221ENST00000552540 TRIM28Q13263 835 aaKnown RBP17.95■□□□□ 0.46
NACA-221ENST00000552540 SLC4A10Q6U841 1118 aa17.95■□□□□ 0.46
NACA-221ENST00000552540 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
NACA-221ENST00000552540 TNRC6CQ9HCJ0 1690 aaKnown RBP17.95■□□□□ 0.46
NACA-221ENST00000552540 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
NACA-221ENST00000552540 CCDC191Q8NCU4 936 aa17.94■□□□□ 0.46
NACA-221ENST00000552540 COL11A2P13942 1736 aaPredicted RBP17.94■□□□□ 0.46
NACA-221ENST00000552540 NEURL1BA8MQ27 555 aa17.93■□□□□ 0.46
NACA-221ENST00000552540 DALRD3Q5D0E6 543 aaKnown RBP17.93■□□□□ 0.46
NACA-221ENST00000552540 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
NACA-221ENST00000552540 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
NACA-221ENST00000552540 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
NACA-221ENST00000552540 BCAR3O75815 825 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 SRGNP10124 158 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 ZBTB38Q8NAP3 1195 aaPredicted RBP17.92■□□□□ 0.46
NACA-221ENST00000552540 MASTLQ96GX5 879 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
NACA-221ENST00000552540 BRCA1P38398 1863 aaKnown RBP17.92■□□□□ 0.46
NACA-221ENST00000552540 PTPRCP08575 1304 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
NACA-221ENST00000552540 DLEC1Q9Y238 1755 aa17.91■□□□□ 0.46
NACA-221ENST00000552540 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
NACA-221ENST00000552540 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
NACA-221ENST00000552540 RPGRQ92834 1020 aaKnown RBP17.91■□□□□ 0.46
NACA-221ENST00000552540 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
NACA-221ENST00000552540 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
NACA-221ENST00000552540 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
NACA-221ENST00000552540 NPR1P16066 1061 aa17.9■□□□□ 0.46
NACA-221ENST00000552540 BEND3Q5T5X7 828 aa17.9■□□□□ 0.46
NACA-221ENST00000552540 STYK1Q6J9G0 422 aa17.9■□□□□ 0.46
NACA-221ENST00000552540 CACNA1SQ13698 1873 aa17.9■□□□□ 0.46
NACA-221ENST00000552540 GCKRQ14397 625 aa17.89■□□□□ 0.45
NACA-221ENST00000552540 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
NACA-221ENST00000552540 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
NACA-221ENST00000552540 DDX60Q8IY21 1712 aaKnown RBP17.89■□□□□ 0.45
NACA-221ENST00000552540 RIC1Q4ADV7 1423 aa17.89■□□□□ 0.45
NACA-221ENST00000552540 GRIN3BO60391 1043 aa17.88■□□□□ 0.45
NACA-221ENST00000552540 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
NACA-221ENST00000552540 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
NACA-221ENST00000552540 LAMB2P55268 1798 aa17.88■□□□□ 0.45
NACA-221ENST00000552540 PRPF40BQ6NWY9 871 aaKnown RBP17.87■□□□□ 0.45
NACA-221ENST00000552540 ARHGAP27Q6ZUM4 889 aa17.87■□□□□ 0.45
NACA-221ENST00000552540 UBE3BQ7Z3V4 1068 aa17.87■□□□□ 0.45
NACA-221ENST00000552540 RBM17Q96I25 401 aaKnown RBP17.87■□□□□ 0.45
NACA-221ENST00000552540 H7C1W4 665 aa17.86■□□□□ 0.45
NACA-221ENST00000552540 C21orf2O43822 256 aa17.86■□□□□ 0.45
NACA-221ENST00000552540 BRPF1P55201 1214 aaPredicted RBP17.86■□□□□ 0.45
NACA-221ENST00000552540 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
NACA-221ENST00000552540 API5Q9BZZ5 524 aaKnown RBP17.86■□□□□ 0.45
NACA-221ENST00000552540 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
NACA-221ENST00000552540 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
NACA-221ENST00000552540 PDE8AO60658 829 aa17.85■□□□□ 0.45
NACA-221ENST00000552540 ALDH1B1P30837 517 aa17.85■□□□□ 0.45
NACA-221ENST00000552540 ARFGEF1Q9Y6D6 1849 aa17.85■□□□□ 0.45
NACA-221ENST00000552540 CDHR2Q9BYE9 1310 aa17.84■□□□□ 0.45
NACA-221ENST00000552540 ALDH1L1O75891 902 aa17.84■□□□□ 0.45
NACA-221ENST00000552540 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
NACA-221ENST00000552540 DDX46Q7L014 1031 aaKnown RBP17.84■□□□□ 0.45
NACA-221ENST00000552540 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
NACA-221ENST00000552540 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
NACA-221ENST00000552540 IPO8O15397 1037 aaKnown RBP17.83■□□□□ 0.44
NACA-221ENST00000552540 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
NACA-221ENST00000552540 SF3B3Q15393 1217 aaKnown RBP17.83■□□□□ 0.44
NACA-221ENST00000552540 OLFM4Q6UX06 510 aa17.83■□□□□ 0.44
NACA-221ENST00000552540 CRAMP1Q96RY5 1269 aa17.83■□□□□ 0.44
NACA-221ENST00000552540 ABCC4O15439 1325 aa17.82■□□□□ 0.44
NACA-221ENST00000552540 GRM8O00222 908 aa17.82■□□□□ 0.44
NACA-221ENST00000552540 CASP7P55210 303 aa17.82■□□□□ 0.44
NACA-221ENST00000552540 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
NACA-221ENST00000552540 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
NACA-221ENST00000552540 TAF1P21675 1872 aa17.82■□□□□ 0.44
NACA-221ENST00000552540 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
NACA-221ENST00000552540 TRIM27P14373 513 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms