RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 MAP3K2Q9Y2U5 619 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
TUBA1C-209ENST00000552448 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
TUBA1C-209ENST00000552448 REC8O95072 547 aa13.22□□□□□ -0.29
TUBA1C-209ENST00000552448 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
TUBA1C-209ENST00000552448 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
TUBA1C-209ENST00000552448 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 FAM193AP78312 1265 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 CBX1P83916 185 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 C5P01031 1676 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 NRAPQ86VF7 1730 aa13.21□□□□□ -0.29
TUBA1C-209ENST00000552448 SURF6O75683 361 aaKnown RBP13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 MTX1Q13505 466 aa13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 ERC2O15083 957 aa13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 AOX1Q06278 1338 aa13.2□□□□□ -0.3
TUBA1C-209ENST00000552448 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
TUBA1C-209ENST00000552448 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
TUBA1C-209ENST00000552448 INTS4Q96HW7 963 aaKnown RBP13.19□□□□□ -0.3
TUBA1C-209ENST00000552448 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
TUBA1C-209ENST00000552448 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
TUBA1C-209ENST00000552448 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
TUBA1C-209ENST00000552448 LAMB4A4D0S4 1761 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 CTIFO43310 598 aaKnown RBP13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 CABP4P57796 275 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 TTC5Q8N0Z6 440 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 C9orf78Q9NZ63 289 aaPredicted RBP13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 UTYO14607 1347 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 BRD1O95696 1058 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 CREBRFQ8IUR6 639 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 ARID3AQ99856 593 aa13.18□□□□□ -0.3
TUBA1C-209ENST00000552448 LRP6O75581 1613 aa13.17□□□□□ -0.3
TUBA1C-209ENST00000552448 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
TUBA1C-209ENST00000552448 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
TUBA1C-209ENST00000552448 JCADQ9P266 1359 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 CCDC66A2RUB6 948 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 CHMLP26374 656 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 HSP90AB4PQ58FF6 505 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 LRP10Q7Z4F1 713 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 ESYT1Q9BSJ8 1104 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 GRM8O00222 908 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 IGKV5-2P06315 115 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 CUL4AQ13619 759 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
TUBA1C-209ENST00000552448 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 MYL6BP14649 208 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 PKP1Q13835 747 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 CCDC183Q5T5S1 534 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 SLIT2O94813 1529 aa13.15□□□□□ -0.3
TUBA1C-209ENST00000552448 GLI3P10071 1580 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 SLC20A2Q08357 652 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 TNS2Q63HR2 1409 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
TUBA1C-209ENST00000552448 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 KIAA1524Q8TCG1 905 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 CGNQ9P2M7 1197 aaKnown RBP13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 KDM4AO75164 1064 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 ADCY5O95622 1261 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 MCCP23508 829 aa13.13□□□□□ -0.31
TUBA1C-209ENST00000552448 ANAPC15P60006 121 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms