RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-214ENST00000552089 COLQQ9Y215 455 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-214ENST00000552089 COL4A5P29400 1685 aa15.75■□□□□ 0.11
RBFOX1-214ENST00000552089 ADARB2Q9NS39 739 aaKnown RBP15.75■□□□□ 0.11
RBFOX1-214ENST00000552089 SCN7AQ01118 1682 aa15.75■□□□□ 0.11
RBFOX1-214ENST00000552089 HDAC9Q9UKV0 1011 aa15.74■□□□□ 0.11
RBFOX1-214ENST00000552089 A0A087WZG4 1122 aa15.73■□□□□ 0.11
RBFOX1-214ENST00000552089 NPR1P16066 1061 aa15.73■□□□□ 0.11
RBFOX1-214ENST00000552089 CCDC184Q52MB2 194 aa15.73■□□□□ 0.11
RBFOX1-214ENST00000552089 C1orf141Q5JVX7 400 aa15.73■□□□□ 0.11
RBFOX1-214ENST00000552089 CC2D1BQ5T0F9 858 aaKnown RBP15.73■□□□□ 0.11
RBFOX1-214ENST00000552089 RGMBQ6NW40 437 aa15.73■□□□□ 0.11
RBFOX1-214ENST00000552089 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
RBFOX1-214ENST00000552089 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
RBFOX1-214ENST00000552089 EIF4A2Q14240 407 aaKnown RBP15.71■□□□□ 0.11
RBFOX1-214ENST00000552089 SETDB2Q96T68 719 aa15.71■□□□□ 0.11
RBFOX1-214ENST00000552089 GPRC5DQ9NZD1 345 aa15.71■□□□□ 0.11
RBFOX1-214ENST00000552089 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
RBFOX1-214ENST00000552089 AMOTQ4VCS5 1084 aa15.7■□□□□ 0.1
RBFOX1-214ENST00000552089 FBXO46Q6PJ61 603 aaPredicted RBP15.7■□□□□ 0.1
RBFOX1-214ENST00000552089 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
RBFOX1-214ENST00000552089 PSMD1Q99460 953 aa15.7■□□□□ 0.1
RBFOX1-214ENST00000552089 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
RBFOX1-214ENST00000552089 TBC1D2BQ9UPU7 963 aa15.69■□□□□ 0.1
RBFOX1-214ENST00000552089 SUPT16HQ9Y5B9 1047 aaKnown RBP15.69■□□□□ 0.1
RBFOX1-214ENST00000552089 SNED1Q8TER0 1413 aa15.69■□□□□ 0.1
RBFOX1-214ENST00000552089 PITPNM2Q9BZ72 1349 aa15.69■□□□□ 0.1
RBFOX1-214ENST00000552089 ZNF157P51786 506 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 CDC37L1Q7L3B6 337 aa15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 LARGE2Q8N3Y3 721 aa15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 CSRNP1Q96S65 589 aa15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 ZNF330Q9Y3S2 320 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 ZNF296Q8WUU4 475 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-214ENST00000552089 POTEFA5A3E0 1075 aa15.67■□□□□ 0.1
RBFOX1-214ENST00000552089 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
RBFOX1-214ENST00000552089 COL6A3P12111 3177 aa15.67■□□□□ 0.1
RBFOX1-214ENST00000552089 DLK2Q6UY11 383 aa15.66■□□□□ 0.1
RBFOX1-214ENST00000552089 USP48Q86UV5 1035 aa15.66■□□□□ 0.1
RBFOX1-214ENST00000552089 ZC3H15Q8WU90 426 aaKnown RBP15.66■□□□□ 0.1
RBFOX1-214ENST00000552089 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
RBFOX1-214ENST00000552089 GBA2Q9HCG7 927 aaPredicted RBP15.66■□□□□ 0.1
RBFOX1-214ENST00000552089 AKAP11Q9UKA4 1901 aa15.66■□□□□ 0.1
RBFOX1-214ENST00000552089 SLC10A3P09131 477 aa15.65■□□□□ 0.1
RBFOX1-214ENST00000552089 PPP2R1AP30153 589 aa15.65■□□□□ 0.1
RBFOX1-214ENST00000552089 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
RBFOX1-214ENST00000552089 NBPF5PQ86XG9 351 aaPredicted RBP15.65■□□□□ 0.1
RBFOX1-214ENST00000552089 NIM1KQ8IY84 436 aa15.65■□□□□ 0.1
RBFOX1-214ENST00000552089 KLRG2A4D1S0 409 aaPredicted RBP15.64■□□□□ 0.09
RBFOX1-214ENST00000552089 STARD3NLO95772 234 aa15.64■□□□□ 0.09
RBFOX1-214ENST00000552089 GMPSP49915 693 aaPredicted RBP15.64■□□□□ 0.09
RBFOX1-214ENST00000552089 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
RBFOX1-214ENST00000552089 C2orf69Q8N8R5 385 aa15.64■□□□□ 0.09
RBFOX1-214ENST00000552089 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
RBFOX1-214ENST00000552089 CAMTA2O94983 1202 aa15.63■□□□□ 0.09
RBFOX1-214ENST00000552089 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
RBFOX1-214ENST00000552089 HIRAP54198 1017 aaPredicted RBP15.63■□□□□ 0.09
RBFOX1-214ENST00000552089 TRPM4Q8TD43 1214 aa15.63■□□□□ 0.09
RBFOX1-214ENST00000552089 HTTP42858 3142 aa15.63■□□□□ 0.09
RBFOX1-214ENST00000552089 WDR43Q15061 677 aaKnown RBP eCLIP15.62■□□□□ 0.09
RBFOX1-214ENST00000552089 MRC1P22897 1456 aa15.62■□□□□ 0.09
RBFOX1-214ENST00000552089 TBC1D8O95759 1140 aa15.61■□□□□ 0.09
RBFOX1-214ENST00000552089 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
RBFOX1-214ENST00000552089 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
RBFOX1-214ENST00000552089 AEBP1Q8IUX7 1158 aa15.6■□□□□ 0.09
RBFOX1-214ENST00000552089 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
RBFOX1-214ENST00000552089 CDHR2Q9BYE9 1310 aa15.59■□□□□ 0.09
RBFOX1-214ENST00000552089 PPIP5K2O43314 1243 aa15.59■□□□□ 0.09
RBFOX1-214ENST00000552089 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
RBFOX1-214ENST00000552089 CXCL9Q07325 125 aa15.59■□□□□ 0.09
RBFOX1-214ENST00000552089 INTS3Q68E01 1043 aaKnown RBP15.59■□□□□ 0.09
RBFOX1-214ENST00000552089 CEP290O15078 2479 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 H0YGN5 161 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 GPR25O00155 361 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 KRT26Q7Z3Y9 468 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 NPM2Q86SE8 214 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 RASAL3Q86YV0 1011 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 BCL2L13Q9BXK5 485 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 LGR6Q9HBX8 967 aa15.58■□□□□ 0.08
RBFOX1-214ENST00000552089 RANBP2P49792 3224 aaKnown RBP15.57■□□□□ 0.08
RBFOX1-214ENST00000552089 EN2P19622 333 aaPredicted RBP15.57■□□□□ 0.08
RBFOX1-214ENST00000552089 AOC3Q16853 763 aa15.57■□□□□ 0.08
RBFOX1-214ENST00000552089 SLC51AQ86UW1 340 aa15.57■□□□□ 0.08
RBFOX1-214ENST00000552089 CFAP53Q96M91 514 aa15.57■□□□□ 0.08
RBFOX1-214ENST00000552089 PAPPA2Q9BXP8 1791 aa15.57■□□□□ 0.08
RBFOX1-214ENST00000552089 ADM5C9JUS6 153 aa15.56■□□□□ 0.08
RBFOX1-214ENST00000552089 DZIP3Q86Y13 1208 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-214ENST00000552089 BRCA2P51587 3418 aa15.55■□□□□ 0.08
RBFOX1-214ENST00000552089 SHTN1A0MZ66 631 aa15.55■□□□□ 0.08
RBFOX1-214ENST00000552089 GRIPAP1Q4V328 841 aa15.55■□□□□ 0.08
RBFOX1-214ENST00000552089 TPTE2Q6XPS3 522 aa15.55■□□□□ 0.08
RBFOX1-214ENST00000552089 ZNRF3Q9ULT6 936 aa15.55■□□□□ 0.08
RBFOX1-214ENST00000552089 UBR2Q8IWV8 1755 aa15.55■□□□□ 0.08
RBFOX1-214ENST00000552089 FAM177BA6PVY3 158 aa15.54■□□□□ 0.08
RBFOX1-214ENST00000552089 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-214ENST00000552089 FKTNO75072 461 aa15.54■□□□□ 0.08
RBFOX1-214ENST00000552089 IL13P35225 146 aa15.54■□□□□ 0.08
RBFOX1-214ENST00000552089 NOM1Q5C9Z4 860 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms