RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 CCDC30Q5VVM6 783 aa21.58■■□□□ 1.05
BRF1-219ENST00000551787 TWISTNBQ3B726 338 aaPredicted RBP21.57■■□□□ 1.04
BRF1-219ENST00000551787 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
BRF1-219ENST00000551787 RIC3Q7Z5B4 369 aa21.57■■□□□ 1.04
BRF1-219ENST00000551787 FANCIQ9NVI1 1328 aa21.56■■□□□ 1.04
BRF1-219ENST00000551787 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
BRF1-219ENST00000551787 DLEC1Q9Y238 1755 aa21.56■■□□□ 1.04
BRF1-219ENST00000551787 HCLS1P14317 486 aaPredicted RBP21.55■■□□□ 1.04
BRF1-219ENST00000551787 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
BRF1-219ENST00000551787 GOLGA2Q08379 1002 aa21.55■■□□□ 1.04
BRF1-219ENST00000551787 CRY2Q49AN0 593 aa21.55■■□□□ 1.04
BRF1-219ENST00000551787 RPGRQ92834 1020 aaKnown RBP21.55■■□□□ 1.04
BRF1-219ENST00000551787 IBTKQ9P2D0 1353 aaPredicted RBP21.54■■□□□ 1.04
BRF1-219ENST00000551787 LMNB1P20700 586 aa21.54■■□□□ 1.04
BRF1-219ENST00000551787 SLC10A5Q5PT55 438 aa21.54■■□□□ 1.04
BRF1-219ENST00000551787 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
BRF1-219ENST00000551787 ISCA1Q9BUE6 129 aa21.54■■□□□ 1.04
BRF1-219ENST00000551787 SLX4Q8IY92 1834 aa21.54■■□□□ 1.04
BRF1-219ENST00000551787 ALDH1B1P30837 517 aa21.53■■□□□ 1.04
BRF1-219ENST00000551787 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
BRF1-219ENST00000551787 NLRP3Q96P20 1036 aa21.53■■□□□ 1.04
BRF1-219ENST00000551787 FAM89AQ96GI7 184 aa21.52■■□□□ 1.04
BRF1-219ENST00000551787 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
BRF1-219ENST00000551787 CHMP4AQ9BY43 222 aa21.52■■□□□ 1.04
BRF1-219ENST00000551787 TNRC6CQ9HCJ0 1690 aaKnown RBP21.51■■□□□ 1.03
BRF1-219ENST00000551787 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
BRF1-219ENST00000551787 G2E3Q7L622 706 aa21.51■■□□□ 1.03
BRF1-219ENST00000551787 MYD88Q99836 296 aa21.51■■□□□ 1.03
BRF1-219ENST00000551787 SH3TC1Q8TE82 1336 aa21.51■■□□□ 1.03
BRF1-219ENST00000551787 VAMP4O75379 141 aa21.5■■□□□ 1.03
BRF1-219ENST00000551787 HOXA10P31260 410 aaPredicted RBP21.5■■□□□ 1.03
BRF1-219ENST00000551787 SLC51AQ86UW1 340 aa21.5■■□□□ 1.03
BRF1-219ENST00000551787 RBM17Q96I25 401 aaKnown RBP21.5■■□□□ 1.03
BRF1-219ENST00000551787 TAOK3Q9H2K8 898 aa21.5■■□□□ 1.03
BRF1-219ENST00000551787 CCER2I3L3R5 266 aa21.49■■□□□ 1.03
BRF1-219ENST00000551787 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
BRF1-219ENST00000551787 CCDC93Q567U6 631 aa21.49■■□□□ 1.03
BRF1-219ENST00000551787 SOGA3Q5TF21 947 aa21.49■■□□□ 1.03
BRF1-219ENST00000551787 NMRK2Q9NPI5 230 aa21.49■■□□□ 1.03
BRF1-219ENST00000551787 MAP3K2Q9Y2U5 619 aa21.49■■□□□ 1.03
BRF1-219ENST00000551787 C1QTNF8P60827 252 aa21.48■■□□□ 1.03
BRF1-219ENST00000551787 JARID2Q92833 1246 aaPredicted RBP21.48■■□□□ 1.03
BRF1-219ENST00000551787 MYH16Q9H6N6 1097 aa21.48■■□□□ 1.03
BRF1-219ENST00000551787 PI4KAP2A4QPH2 592 aa21.47■■□□□ 1.03
BRF1-219ENST00000551787 TRIM28Q13263 835 aaKnown RBP21.47■■□□□ 1.03
BRF1-219ENST00000551787 DIEXFQ68CQ4 756 aaKnown RBP21.47■■□□□ 1.03
BRF1-219ENST00000551787 PI4KAP1Q8N8J0 262 aa21.47■■□□□ 1.03
BRF1-219ENST00000551787 CRAMP1Q96RY5 1269 aa21.47■■□□□ 1.03
BRF1-219ENST00000551787 METTL22Q9BUU2 404 aaPredicted RBP21.47■■□□□ 1.03
BRF1-219ENST00000551787 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
BRF1-219ENST00000551787 CACNA1SQ13698 1873 aa21.46■■□□□ 1.03
BRF1-219ENST00000551787 KSR2Q6VAB6 950 aa21.46■■□□□ 1.03
BRF1-219ENST00000551787 ZNF277Q9NRM2 450 aaPredicted RBP21.46■■□□□ 1.03
BRF1-219ENST00000551787 ZNF521Q96K83 1311 aa21.46■■□□□ 1.03
BRF1-219ENST00000551787 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
BRF1-219ENST00000551787 SBF1O95248 1867 aa21.45■■□□□ 1.02
BRF1-219ENST00000551787 KIF3CO14782 793 aa21.45■■□□□ 1.02
BRF1-219ENST00000551787 PPEF1O14829 653 aaPredicted RBP21.45■■□□□ 1.02
BRF1-219ENST00000551787 RTKN2Q8IZC4 609 aa21.45■■□□□ 1.02
BRF1-219ENST00000551787 MIER1Q8N108 512 aa21.45■■□□□ 1.02
BRF1-219ENST00000551787 IRS4O14654 1257 aaPredicted RBP21.44■■□□□ 1.02
BRF1-219ENST00000551787 RRAGCQ9HB90 399 aa21.44■■□□□ 1.02
BRF1-219ENST00000551787 LTBP3Q9NS15 1303 aa21.44■■□□□ 1.02
BRF1-219ENST00000551787 ANKRD36CQ5JPF3 1778 aa21.43■■□□□ 1.02
BRF1-219ENST00000551787 FKBP4Q02790 459 aaKnown RBP eCLIP21.43■■□□□ 1.02
BRF1-219ENST00000551787 DDX46Q7L014 1031 aaKnown RBP21.43■■□□□ 1.02
BRF1-219ENST00000551787 CWC25Q9NXE8 425 aaPredicted RBP21.43■■□□□ 1.02
BRF1-219ENST00000551787 ABCC4O15439 1325 aa21.43■■□□□ 1.02
BRF1-219ENST00000551787 KDM2BQ8NHM5 1336 aa21.43■■□□□ 1.02
BRF1-219ENST00000551787 FLIIQ13045 1269 aa21.42■■□□□ 1.02
BRF1-219ENST00000551787 ZBTB38Q8NAP3 1195 aaPredicted RBP21.42■■□□□ 1.02
BRF1-219ENST00000551787 CCDC191Q8NCU4 936 aa21.42■■□□□ 1.02
BRF1-219ENST00000551787 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
BRF1-219ENST00000551787 FKBP5Q13451 457 aaPredicted RBP21.41■■□□□ 1.02
BRF1-219ENST00000551787 FER1L6Q2WGJ9 1857 aa21.41■■□□□ 1.02
BRF1-219ENST00000551787 ZC3H4Q9UPT8 1303 aaKnown RBP21.4■■□□□ 1.02
BRF1-219ENST00000551787 GLTPD2A6NH11 291 aa21.4■■□□□ 1.02
BRF1-219ENST00000551787 CWF19L2Q2TBE0 894 aaKnown RBP21.4■■□□□ 1.02
BRF1-219ENST00000551787 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
BRF1-219ENST00000551787 CDCA7LQ96GN5 454 aa21.4■■□□□ 1.02
BRF1-219ENST00000551787 ATP6V0A2Q9Y487 856 aa21.4■■□□□ 1.02
BRF1-219ENST00000551787 ARFGEF2Q9Y6D5 1785 aa21.4■■□□□ 1.02
BRF1-219ENST00000551787 CCDC88AQ3V6T2 1871 aa21.39■■□□□ 1.02
BRF1-219ENST00000551787 BBOX1O75936 387 aa21.39■■□□□ 1.01
BRF1-219ENST00000551787 NEXNQ0ZGT2 675 aa21.39■■□□□ 1.01
BRF1-219ENST00000551787 SF3B3Q15393 1217 aaKnown RBP21.39■■□□□ 1.01
BRF1-219ENST00000551787 PCCAP05165 728 aaPredicted RBP21.38■■□□□ 1.01
BRF1-219ENST00000551787 IARSP41252 1262 aaKnown RBP21.38■■□□□ 1.01
BRF1-219ENST00000551787 GRAPQ13588 217 aa21.38■■□□□ 1.01
BRF1-219ENST00000551787 DPY19L2Q6NUT2 758 aa21.38■■□□□ 1.01
BRF1-219ENST00000551787 GRAPLQ8TC17 118 aaPredicted RBP21.38■■□□□ 1.01
BRF1-219ENST00000551787 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
BRF1-219ENST00000551787 TMX4Q9H1E5 349 aaPredicted RBP21.38■■□□□ 1.01
BRF1-219ENST00000551787 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
BRF1-219ENST00000551787 E9PSI1 815 aa21.37■■□□□ 1.01
BRF1-219ENST00000551787 F6X3S4 739 aa21.37■■□□□ 1.01
BRF1-219ENST00000551787 CELF1Q92879 486 aaKnown RBP21.37■■□□□ 1.01
BRF1-219ENST00000551787 PSMD1Q99460 953 aa21.37■■□□□ 1.01
BRF1-219ENST00000551787 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
BRF1-219ENST00000551787 SP8Q8IXZ3 490 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms