RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 TRMT112Q9UI30 125 aaKnown RBP19.34■□□□□ 0.69
SMARCD1-211ENST00000551497 KIF13BQ9NQT8 1826 aa19.33■□□□□ 0.69
SMARCD1-211ENST00000551497 BCAR3O75815 825 aa19.33■□□□□ 0.68
SMARCD1-211ENST00000551497 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.68
SMARCD1-211ENST00000551497 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.68
SMARCD1-211ENST00000551497 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
SMARCD1-211ENST00000551497 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 C2CD5Q86YS7 1000 aa19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 N4BP2Q86UW6 1770 aaPredicted RBP19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 ABCC12Q96J65 1359 aa19.32■□□□□ 0.68
SMARCD1-211ENST00000551497 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
SMARCD1-211ENST00000551497 PDE6BP35913 854 aa19.31■□□□□ 0.68
SMARCD1-211ENST00000551497 NEXNQ0ZGT2 675 aa19.31■□□□□ 0.68
SMARCD1-211ENST00000551497 ANKRD31Q8N7Z5 1873 aa19.31■□□□□ 0.68
SMARCD1-211ENST00000551497 NEURL1BA8MQ27 555 aa19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 H0YIN7 160 aa19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 HCLS1P14317 486 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 SLC4A10Q6U841 1118 aa19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 C3orf67Q6ZVT6 689 aa19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 CCDC191Q8NCU4 936 aa19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
SMARCD1-211ENST00000551497 SH3TC1Q8TE82 1336 aa19.29■□□□□ 0.68
SMARCD1-211ENST00000551497 KIAA1551Q9HCM1 1747 aa19.29■□□□□ 0.68
SMARCD1-211ENST00000551497 YY1P25490 414 aa19.29■□□□□ 0.68
SMARCD1-211ENST00000551497 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
SMARCD1-211ENST00000551497 BEND3Q5T5X7 828 aa19.29■□□□□ 0.68
SMARCD1-211ENST00000551497 IBTKQ9P2D0 1353 aaPredicted RBP19.29■□□□□ 0.68
SMARCD1-211ENST00000551497 PTPRCP08575 1304 aa19.28■□□□□ 0.68
SMARCD1-211ENST00000551497 KLRG2A4D1S0 409 aaPredicted RBP19.28■□□□□ 0.68
SMARCD1-211ENST00000551497 LINS1Q8NG48 757 aa19.28■□□□□ 0.68
SMARCD1-211ENST00000551497 SRGNP10124 158 aa19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 YBX3P16989 372 aaKnown RBP eCLIP19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 GCKRQ14397 625 aa19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 GPR162Q16538 588 aa19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 ZNF622Q969S3 477 aaKnown RBP eCLIP19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 PIM2Q9P1W9 311 aa19.27■□□□□ 0.68
SMARCD1-211ENST00000551497 PCCAP05165 728 aaPredicted RBP19.26■□□□□ 0.67
SMARCD1-211ENST00000551497 H7C1W4 665 aa19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 IRS4O14654 1257 aaPredicted RBP19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 NLRP3Q96P20 1036 aa19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
SMARCD1-211ENST00000551497 MASTLQ96GX5 879 aa19.24■□□□□ 0.67
SMARCD1-211ENST00000551497 PDZRN3Q9UPQ7 1066 aa19.24■□□□□ 0.67
SMARCD1-211ENST00000551497 NPR1P16066 1061 aa19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 CRY2Q49AN0 593 aa19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 STYK1Q6J9G0 422 aa19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 UBE3BQ7Z3V4 1068 aa19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 SRCIN1Q9C0H9 1055 aa19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 TNRC6CQ9HCJ0 1690 aaKnown RBP19.23■□□□□ 0.67
SMARCD1-211ENST00000551497 ALDH1L1O75891 902 aa19.22■□□□□ 0.67
SMARCD1-211ENST00000551497 CASP7P55210 303 aa19.22■□□□□ 0.67
SMARCD1-211ENST00000551497 TTLL6Q8N841 843 aa19.22■□□□□ 0.67
SMARCD1-211ENST00000551497 ARHGAP45Q92619 1136 aa19.22■□□□□ 0.67
SMARCD1-211ENST00000551497 API5Q9BZZ5 524 aaKnown RBP19.22■□□□□ 0.67
SMARCD1-211ENST00000551497 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
SMARCD1-211ENST00000551497 COL11A2P13942 1736 aaPredicted RBP19.21■□□□□ 0.67
SMARCD1-211ENST00000551497 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
SMARCD1-211ENST00000551497 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
SMARCD1-211ENST00000551497 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
SMARCD1-211ENST00000551497 RIC1Q4ADV7 1423 aa19.2■□□□□ 0.66
SMARCD1-211ENST00000551497 TRIM27P14373 513 aa19.2■□□□□ 0.66
SMARCD1-211ENST00000551497 HOXA10P31260 410 aaPredicted RBP19.2■□□□□ 0.66
SMARCD1-211ENST00000551497 CNKSR1Q969H4 720 aa19.2■□□□□ 0.66
SMARCD1-211ENST00000551497 ZNF219Q9P2Y4 722 aaPredicted RBP19.2■□□□□ 0.66
SMARCD1-211ENST00000551497 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
SMARCD1-211ENST00000551497 GRM8O00222 908 aa19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 PDE8AO60658 829 aa19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 SF3B3Q15393 1217 aaKnown RBP19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 CLUAP1Q96AJ1 413 aa19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 CDHR2Q9BYE9 1310 aa19.19■□□□□ 0.66
SMARCD1-211ENST00000551497 DDX60Q8IY21 1712 aaKnown RBP19.18■□□□□ 0.66
SMARCD1-211ENST00000551497 PRPF40BQ6NWY9 871 aaKnown RBP19.18■□□□□ 0.66
SMARCD1-211ENST00000551497 RBM17Q96I25 401 aaKnown RBP19.18■□□□□ 0.66
SMARCD1-211ENST00000551497 CCDC85AQ96PX6 553 aaPredicted RBP19.18■□□□□ 0.66
SMARCD1-211ENST00000551497 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
SMARCD1-211ENST00000551497 DLEC1Q9Y238 1755 aa19.17■□□□□ 0.66
SMARCD1-211ENST00000551497 C21orf2O43822 256 aa19.17■□□□□ 0.66
SMARCD1-211ENST00000551497 NBPF7P0C2Y1 421 aaPredicted RBP19.17■□□□□ 0.66
SMARCD1-211ENST00000551497 ALDH1B1P30837 517 aa19.17■□□□□ 0.66
SMARCD1-211ENST00000551497 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
SMARCD1-211ENST00000551497 USP44Q9H0E7 712 aa19.17■□□□□ 0.66
SMARCD1-211ENST00000551497 LAMB2P55268 1798 aa19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 SLC51AQ86UW1 340 aa19.16■□□□□ 0.66
SMARCD1-211ENST00000551497 TTLL11Q8NHH1 800 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms