RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 BCAR3O75815 825 aa9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 SNRPA1P09661 255 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 VEGFAP15692 232 aaPredicted RBP9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 RARSP54136 660 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 SMC1BQ8NDV3 1235 aa9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 CRBNQ96SW2 442 aa9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 SETDB2Q96T68 719 aa9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 ZNF541Q9H0D2 1346 aa9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 LRRC37AA6NMS7 1700 aa9.48□□□□□ -0.89
SMARCD1-210ENST00000551352 EXOSC9Q06265 439 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 C20orf194Q5TEA3 1177 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 TTLL7Q6ZT98 887 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 MASTLQ96GX5 879 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 IFT57Q9NWB7 429 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 RIC1Q4ADV7 1423 aa9.47□□□□□ -0.89
SMARCD1-210ENST00000551352 THSD7BQ9C0I4 1608 aa9.46□□□□□ -0.89
SMARCD1-210ENST00000551352 FAM177BA6PVY3 158 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 HTATSF1O43719 755 aaKnown RBP9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 ZNF853P0CG23 659 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 EIF4A1P60842 406 aaKnown RBP9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 GNAI1P63096 354 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 TAF7Q15545 349 aaPredicted RBP9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 NBPF5PQ86XG9 351 aaPredicted RBP9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 CCDC136Q96JN2 1154 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 TAOK3Q9H2K8 898 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 PDZRN3Q9UPQ7 1066 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 NIP7Q9Y221 180 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.9
SMARCD1-210ENST00000551352 ST5P78524 1137 aa9.45□□□□□ -0.9
SMARCD1-210ENST00000551352 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
SMARCD1-210ENST00000551352 PASKQ96RG2 1323 aa9.45□□□□□ -0.9
SMARCD1-210ENST00000551352 RGL2O15211 777 aa9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 NPR1P16066 1061 aa9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 PDIA6Q15084 440 aa9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 NUTM1Q86Y26 1132 aa9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 ZNF277Q9NRM2 450 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 LAS1LQ9Y4W2 734 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-210ENST00000551352 POLR2AP24928 1970 aaKnown RBP9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 ZNF646O15015 1829 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 IBTKQ9P2D0 1353 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 NTSR2O95665 410 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 ANXA1P04083 346 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 PROSER3Q2NL68 480 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 CRY2Q49AN0 593 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 CCDC93Q567U6 631 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
SMARCD1-210ENST00000551352 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 HSPA1AP0DMV8 641 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 HSPA1BP0DMV9 641 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 GPTP24298 496 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 SUSD4Q5VX71 490 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 SSH1Q8WYL5 1049 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 ZNF428Q96B54 188 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 BCL2L13Q9BXK5 485 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 ZBTB3Q9H5J0 574 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 TAF1DQ9H5J8 278 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 SMC4Q9NTJ3 1288 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 ZNF652Q9Y2D9 606 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
SMARCD1-210ENST00000551352 PSME4Q14997 1843 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 SPEF2Q9C093 1822 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 FZD9O00144 591 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 CHL1O00533 1208 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 MYL6BP14649 208 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 ALDH1L2Q3SY69 923 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 TPTE2Q6XPS3 522 aa9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 FRAT1Q92837 279 aaPredicted RBP9.41□□□□□ -0.9
SMARCD1-210ENST00000551352 CNTNAP1P78357 1384 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 KIF16BQ96L93 1317 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 NPHP1O15259 732 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 VAMP4O75379 141 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 KRT24Q2M2I5 525 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 ZKSCAN2Q63HK3 967 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 SYNE4Q8N205 404 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 PANK1Q8TE04 598 aa9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
SMARCD1-210ENST00000551352 MS4A1P11836 297 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms