RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
CNOT2-229ENST00000551179 PCDHB8Q9UN66 801 aa12.42□□□□□ -0.42
CNOT2-229ENST00000551179 COL15A1P39059 1388 aa12.42□□□□□ -0.42
CNOT2-229ENST00000551179 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
CNOT2-229ENST00000551179 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-229ENST00000551179 FRAT2O75474 233 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-229ENST00000551179 GCKRQ14397 625 aa12.41□□□□□ -0.42
CNOT2-229ENST00000551179 PDIA6Q15084 440 aa12.41□□□□□ -0.42
CNOT2-229ENST00000551179 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
CNOT2-229ENST00000551179 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
CNOT2-229ENST00000551179 PAPPAQ13219 1627 aa12.4□□□□□ -0.42
CNOT2-229ENST00000551179 CHMLP26374 656 aa12.4□□□□□ -0.42
CNOT2-229ENST00000551179 NUCB2P80303 420 aa12.4□□□□□ -0.42
CNOT2-229ENST00000551179 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
CNOT2-229ENST00000551179 AACSQ86V21 672 aa12.4□□□□□ -0.42
CNOT2-229ENST00000551179 BICC1Q9H694 974 aaKnown RBP12.4□□□□□ -0.42
CNOT2-229ENST00000551179 CWC22Q9HCG8 908 aaKnown RBP12.4□□□□□ -0.42
CNOT2-229ENST00000551179 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
CNOT2-229ENST00000551179 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-229ENST00000551179 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
CNOT2-229ENST00000551179 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 RAD50Q92878 1312 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
CNOT2-229ENST00000551179 A0A087WZG4 1122 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 STARD3NLO95772 234 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
CNOT2-229ENST00000551179 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
CNOT2-229ENST00000551179 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
CNOT2-229ENST00000551179 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 LRP6O75581 1613 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 KIF2CQ99661 725 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
CNOT2-229ENST00000551179 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
CNOT2-229ENST00000551179 MCM4P33991 863 aa12.36□□□□□ -0.43
CNOT2-229ENST00000551179 HSP90AB3PQ58FF7 597 aa12.36□□□□□ -0.43
CNOT2-229ENST00000551179 L1TD1Q5T7N2 865 aaKnown RBP12.36□□□□□ -0.43
CNOT2-229ENST00000551179 UBE3BQ7Z3V4 1068 aa12.36□□□□□ -0.43
CNOT2-229ENST00000551179 PI4K2BQ8TCG2 481 aa12.36□□□□□ -0.43
CNOT2-229ENST00000551179 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
CNOT2-229ENST00000551179 TUBGCP6Q96RT7 1819 aa12.35□□□□□ -0.43
CNOT2-229ENST00000551179 RGL2O15211 777 aa12.35□□□□□ -0.43
CNOT2-229ENST00000551179 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
CNOT2-229ENST00000551179 KCNJ4P48050 445 aa12.35□□□□□ -0.43
CNOT2-229ENST00000551179 SKOR2Q2VWA4 1001 aaPredicted RBP12.35□□□□□ -0.43
CNOT2-229ENST00000551179 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
CNOT2-229ENST00000551179 SIL1Q9H173 461 aa12.35□□□□□ -0.43
CNOT2-229ENST00000551179 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
CNOT2-229ENST00000551179 GLI3P10071 1580 aa12.35□□□□□ -0.43
CNOT2-229ENST00000551179 RFX7Q2KHR2 1363 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 EXOC5O00471 708 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 SGSM2O43147 1006 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
CNOT2-229ENST00000551179 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 COPRSQ9NQ92 184 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
CNOT2-229ENST00000551179 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
CNOT2-229ENST00000551179 MAP4K4O95819 1239 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-229ENST00000551179 ZKSCAN1P17029 563 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-229ENST00000551179 NEK4P51957 841 aa12.33□□□□□ -0.44
CNOT2-229ENST00000551179 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
CNOT2-229ENST00000551179 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-229ENST00000551179 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
CNOT2-229ENST00000551179 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CNOT2-229ENST00000551179 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
CNOT2-229ENST00000551179 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-229ENST00000551179 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
CNOT2-229ENST00000551179 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
CNOT2-229ENST00000551179 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-229ENST00000551179 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
CNOT2-229ENST00000551179 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
CNOT2-229ENST00000551179 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
CNOT2-229ENST00000551179 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
CNOT2-229ENST00000551179 HSPA4P34932 840 aa12.31□□□□□ -0.44
CNOT2-229ENST00000551179 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
CNOT2-229ENST00000551179 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
CNOT2-229ENST00000551179 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-229ENST00000551179 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
CNOT2-229ENST00000551179 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
CNOT2-229ENST00000551179 H7C1W4 665 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 TOM1O60784 492 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 A1BGP04217 495 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 PSMA5P28066 241 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 DDIT3P35638 169 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 IL15P40933 162 aaPredicted RBP12.3□□□□□ -0.44
CNOT2-229ENST00000551179 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
CNOT2-229ENST00000551179 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
CNOT2-229ENST00000551179 ARXQ96QS3 562 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
CNOT2-229ENST00000551179 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms