RNA–Protein interactions for RNA: ENST00000550993.1

ATAD2-208, Transcript of ATPase family, AAA domain containing 2, humanhuman

TSL 3

Gene ATAD2, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD2-208ENST00000550993 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L21D6R901 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 ANP32CO43423 234 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 ADH1CP00326 375 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 V9GY48 417 aaPredicted RBP9.24□□□□□ -0.93
ATAD2-208ENST00000550993 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
ATAD2-208ENST00000550993 FAM196BA6NMK8 535 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 GDF9O60383 454 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 LTKP29376 864 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 TMEM164Q5U3C3 297 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 TRIM67Q6ZTA4 783 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 PUS7Q96PZ0 661 aaKnown RBP9.23□□□□□ -0.93
ATAD2-208ENST00000550993 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
ATAD2-208ENST00000550993 NOD1Q9Y239 953 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 METP08581 1390 aa9.23□□□□□ -0.93
ATAD2-208ENST00000550993 LILRA1O75019 489 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 STAU1O95793 577 aaKnown RBP9.22□□□□□ -0.93
ATAD2-208ENST00000550993 ALDH1A1P00352 501 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 GTF2IP78347 998 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 ELOAQ14241 798 aaKnown RBP9.22□□□□□ -0.93
ATAD2-208ENST00000550993 PPP1R26Q5T8A7 1209 aaPredicted RBP9.22□□□□□ -0.93
ATAD2-208ENST00000550993 ZNF594Q96JF6 807 aaPredicted RBP9.22□□□□□ -0.93
ATAD2-208ENST00000550993 POLR3GLQ9BT43 218 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 DNAAF2Q9NVR5 837 aaKnown RBP9.22□□□□□ -0.93
ATAD2-208ENST00000550993 SLAIN2Q9P270 581 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 USP32Q8NFA0 1604 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 NINLQ9Y2I6 1382 aa9.22□□□□□ -0.93
ATAD2-208ENST00000550993 NWD1Q149M9 1564 aa9.21□□□□□ -0.93
ATAD2-208ENST00000550993 J3QL48 77 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 TNFRSF10AO00220 468 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 ADD1P35611 737 aaKnown RBP9.21□□□□□ -0.94
ATAD2-208ENST00000550993 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 DPYDQ12882 1025 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 USP4Q13107 963 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 LARP1Q6PKG0 1096 aaKnown RBP9.21□□□□□ -0.94
ATAD2-208ENST00000550993 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
ATAD2-208ENST00000550993 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 EVC2Q86UK5 1308 aa9.21□□□□□ -0.94
ATAD2-208ENST00000550993 KTN1Q86UP2 1357 aaKnown RBP9.21□□□□□ -0.94
ATAD2-208ENST00000550993 CHD2O14647 1828 aaKnown RBP9.2□□□□□ -0.94
ATAD2-208ENST00000550993 ANKLE2Q86XL3 938 aa9.2□□□□□ -0.94
ATAD2-208ENST00000550993 ANKMY2Q8IV38 441 aa9.2□□□□□ -0.94
ATAD2-208ENST00000550993 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
ATAD2-208ENST00000550993 OSBPL3Q9H4L5 887 aa9.2□□□□□ -0.94
ATAD2-208ENST00000550993 TBX22Q9Y458 520 aa9.2□□□□□ -0.94
ATAD2-208ENST00000550993 ATAD2Q6PL18 1390 aa9.2□□□□□ -0.94
ATAD2-208ENST00000550993 CCER2I3L3R5 266 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 NR5A1Q13285 461 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 TRIM50Q86XT4 487 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 POGKQ9P215 609 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 STK26Q9P289 416 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 NPHP4O75161 1426 aaPredicted RBP9.19□□□□□ -0.94
ATAD2-208ENST00000550993 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
ATAD2-208ENST00000550993 CCDC102BQ68D86 513 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 CCDC125Q86Z20 511 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 TOPAZ1Q8N9V7 1692 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 TPCN2Q8NHX9 752 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 SNIP1Q8TAD8 396 aaKnown RBP9.18□□□□□ -0.94
ATAD2-208ENST00000550993 KLF16Q9BXK1 252 aaPredicted RBP9.18□□□□□ -0.94
ATAD2-208ENST00000550993 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 USTQ9Y2C2 406 aa9.18□□□□□ -0.94
ATAD2-208ENST00000550993 ITSN1Q15811 1721 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
ATAD2-208ENST00000550993 LMTK3Q96Q04 1460 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 NPC1L1Q9UHC9 1359 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 PLEKHH1Q9ULM0 1364 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 SFI1A8K8P3 1242 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 LGR5O75473 907 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 NNTQ13423 1086 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 SIX5Q8N196 739 aa9.17□□□□□ -0.94
ATAD2-208ENST00000550993 PRKRIP1Q9H875 184 aaPredicted RBP9.17□□□□□ -0.94
ATAD2-208ENST00000550993 ATP7BP35670 1465 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 ANKRD36BQ8N2N9 1353 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 SMPD1P17405 629 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
ATAD2-208ENST00000550993 FAM200AQ8TCP9 573 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
ATAD2-208ENST00000550993 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.94
ATAD2-208ENST00000550993 PARD3Q8TEW0 1356 aa9.15□□□□□ -0.94
ATAD2-208ENST00000550993 NALCNQ8IZF0 1738 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms