RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 BCS1LQ9Y276 419 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 ITGAEP38570 1179 aa10.57□□□□□ -0.72
NPAS3-208ENST00000550662 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
NPAS3-208ENST00000550662 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
NPAS3-208ENST00000550662 NEFLP07196 543 aa10.56□□□□□ -0.72
NPAS3-208ENST00000550662 ATP4AP20648 1035 aa10.56□□□□□ -0.72
NPAS3-208ENST00000550662 SOS2Q07890 1332 aaPredicted RBP10.56□□□□□ -0.72
NPAS3-208ENST00000550662 GPR182O15218 404 aa10.55□□□□□ -0.72
NPAS3-208ENST00000550662 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
NPAS3-208ENST00000550662 DMGDHQ9UI17 866 aaKnown RBP10.55□□□□□ -0.72
NPAS3-208ENST00000550662 MSX1P28360 303 aa10.54□□□□□ -0.72
NPAS3-208ENST00000550662 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
NPAS3-208ENST00000550662 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
NPAS3-208ENST00000550662 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
NPAS3-208ENST00000550662 ZIC5Q96T25 663 aa10.54□□□□□ -0.72
NPAS3-208ENST00000550662 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
NPAS3-208ENST00000550662 LDHBP07195 334 aaKnown RBP10.53□□□□□ -0.72
NPAS3-208ENST00000550662 MAPK8P45983 427 aa10.53□□□□□ -0.72
NPAS3-208ENST00000550662 IDH3AP50213 366 aa10.53□□□□□ -0.72
NPAS3-208ENST00000550662 ARSDP51689 593 aa10.53□□□□□ -0.72
NPAS3-208ENST00000550662 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
NPAS3-208ENST00000550662 VSIG8P0DPA2 414 aa10.52□□□□□ -0.73
NPAS3-208ENST00000550662 RHOQP17081 205 aa10.52□□□□□ -0.73
NPAS3-208ENST00000550662 TAGLNQ01995 201 aaKnown RBP10.52□□□□□ -0.73
NPAS3-208ENST00000550662 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.73
NPAS3-208ENST00000550662 HSH2DQ96JZ2 352 aa10.52□□□□□ -0.73
NPAS3-208ENST00000550662 NIF3L1Q9GZT8 377 aa10.52□□□□□ -0.73
NPAS3-208ENST00000550662 FNDC3AQ9Y2H6 1198 aaKnown RBP10.52□□□□□ -0.73
NPAS3-208ENST00000550662 DYRK1BQ9Y463 629 aa10.52□□□□□ -0.73
NPAS3-208ENST00000550662 OPLAHO14841 1288 aa10.51□□□□□ -0.73
NPAS3-208ENST00000550662 MAN1A2O60476 641 aa10.51□□□□□ -0.73
NPAS3-208ENST00000550662 EPB42P16452 691 aa10.51□□□□□ -0.73
NPAS3-208ENST00000550662 BTLAQ7Z6A9 289 aa10.51□□□□□ -0.73
NPAS3-208ENST00000550662 CRISPLD1Q9H336 500 aa10.51□□□□□ -0.73
NPAS3-208ENST00000550662 GJA3Q9Y6H8 435 aa10.51□□□□□ -0.73
NPAS3-208ENST00000550662 A0A1W2PNR3 127 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 FIGNL2A6NMB9 653 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 INPP5BP32019 993 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 ENOX2Q16206 610 aaKnown RBP10.5□□□□□ -0.73
NPAS3-208ENST00000550662 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.5□□□□□ -0.73
NPAS3-208ENST00000550662 C8orf34Q49A92 452 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 ALG1LQ6GMV1 187 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 LRRC69Q6ZNQ3 347 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 IGSF5Q9NSI5 407 aa10.5□□□□□ -0.73
NPAS3-208ENST00000550662 F11P03951 625 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
NPAS3-208ENST00000550662 NLRP8Q86W28 1048 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 PGBD3Q8N328 593 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 DNAJC25Q9H1X3 360 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 GGNBP2Q9H3C7 697 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 C11orf16Q9NQ32 467 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
NPAS3-208ENST00000550662 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
NPAS3-208ENST00000550662 XKR5Q6UX68 686 aa10.48□□□□□ -0.73
NPAS3-208ENST00000550662 FBF1Q8TES7 1133 aa10.48□□□□□ -0.73
NPAS3-208ENST00000550662 PNMA6FA0A0J9YX94 578 aa10.47□□□□□ -0.73
NPAS3-208ENST00000550662 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
NPAS3-208ENST00000550662 LBRQ14739 615 aaKnown RBP10.47□□□□□ -0.73
NPAS3-208ENST00000550662 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
NPAS3-208ENST00000550662 PDE12Q6L8Q7 609 aaKnown RBP10.47□□□□□ -0.73
NPAS3-208ENST00000550662 KLRG1Q96E93 195 aa10.47□□□□□ -0.73
NPAS3-208ENST00000550662 CSRNP1Q96S65 589 aa10.47□□□□□ -0.73
NPAS3-208ENST00000550662 RTCBQ9Y3I0 505 aaKnown RBP10.47□□□□□ -0.73
NPAS3-208ENST00000550662 TYRO3Q06418 890 aa10.46□□□□□ -0.73
NPAS3-208ENST00000550662 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
NPAS3-208ENST00000550662 TCF3P15923 654 aa10.45□□□□□ -0.74
NPAS3-208ENST00000550662 MRPL58Q14197 206 aaKnown RBP10.45□□□□□ -0.74
NPAS3-208ENST00000550662 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
NPAS3-208ENST00000550662 CMTR1Q8N1G2 835 aaKnown RBP10.45□□□□□ -0.74
NPAS3-208ENST00000550662 CEP63Q96MT8 703 aa10.45□□□□□ -0.74
NPAS3-208ENST00000550662 FRMD6Q96NE9 622 aa10.45□□□□□ -0.74
NPAS3-208ENST00000550662 DUSP9Q99956 384 aaKnown RBP10.45□□□□□ -0.74
NPAS3-208ENST00000550662 GPAMQ9HCL2 828 aa10.45□□□□□ -0.74
NPAS3-208ENST00000550662 UBAP1LF5GYI3 381 aa10.44□□□□□ -0.74
NPAS3-208ENST00000550662 EIF1AYO14602 144 aaKnown RBP10.44□□□□□ -0.74
NPAS3-208ENST00000550662 TMC4Q7Z404 712 aa10.44□□□□□ -0.74
NPAS3-208ENST00000550662 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
NPAS3-208ENST00000550662 RUBCNLQ9H714 662 aa10.44□□□□□ -0.74
NPAS3-208ENST00000550662 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
NPAS3-208ENST00000550662 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
NPAS3-208ENST00000550662 DAB2P98082 770 aa10.43□□□□□ -0.74
NPAS3-208ENST00000550662 FIGNL1Q6PIW4 674 aa10.43□□□□□ -0.74
NPAS3-208ENST00000550662 ZNF438Q7Z4V0 828 aa10.43□□□□□ -0.74
NPAS3-208ENST00000550662 SNX29Q8TEQ0 813 aa10.43□□□□□ -0.74
NPAS3-208ENST00000550662 WWC3Q9ULE0 1092 aa10.43□□□□□ -0.74
NPAS3-208ENST00000550662 KCNMB2Q9Y691 235 aa10.43□□□□□ -0.74
NPAS3-208ENST00000550662 SORBS3O60504 671 aa10.42□□□□□ -0.74
NPAS3-208ENST00000550662 RECKO95980 971 aa10.42□□□□□ -0.74
NPAS3-208ENST00000550662 EGFRP00533 1210 aa10.42□□□□□ -0.74
NPAS3-208ENST00000550662 PSMD2Q13200 908 aa10.42□□□□□ -0.74
NPAS3-208ENST00000550662 ORC1Q13415 861 aa10.42□□□□□ -0.74
NPAS3-208ENST00000550662 A6NHS1 94 aa10.41□□□□□ -0.74
NPAS3-208ENST00000550662 TNFRSF21O75509 655 aa10.41□□□□□ -0.74
NPAS3-208ENST00000550662 ELP3Q9H9T3 547 aa10.41□□□□□ -0.74
NPAS3-208ENST00000550662 GNA15P30679 374 aa10.4□□□□□ -0.74
NPAS3-208ENST00000550662 KCNQ4P56696 695 aa10.4□□□□□ -0.74
NPAS3-208ENST00000550662 TRIP4Q15650 581 aaPredicted RBP10.4□□□□□ -0.74
NPAS3-208ENST00000550662 TSNAXIP1Q2TAA8 658 aa10.4□□□□□ -0.74
NPAS3-208ENST00000550662 BRD7Q9NPI1 651 aa10.4□□□□□ -0.74
NPAS3-208ENST00000550662 USP20Q9Y2K6 914 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms