RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 CFAP43Q8NDM7 1665 aa8.65□□□□□ -1.03
PRDM4-206ENST00000550659 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
PRDM4-206ENST00000550659 ZC3H6P61129 1189 aaKnown RBP8.64□□□□□ -1.03
PRDM4-206ENST00000550659 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 DGKZQ13574 1117 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 IFFO2Q5TF58 517 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 C1orf53Q5VUE5 145 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 TMC4Q7Z404 712 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 IFT43Q96FT9 208 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 ZSCAN10Q96SZ4 725 aaPredicted RBP8.64□□□□□ -1.03
PRDM4-206ENST00000550659 DUSP9Q99956 384 aaKnown RBP8.64□□□□□ -1.03
PRDM4-206ENST00000550659 NIFKQ9BYG3 293 aaKnown RBP8.64□□□□□ -1.03
PRDM4-206ENST00000550659 PHACTR1Q9C0D0 580 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 POLIQ9UNA4 740 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 TIAM1Q13009 1591 aa8.64□□□□□ -1.03
PRDM4-206ENST00000550659 MEN1O00255 615 aa8.63□□□□□ -1.03
PRDM4-206ENST00000550659 ZAP70P43403 619 aa8.63□□□□□ -1.03
PRDM4-206ENST00000550659 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
PRDM4-206ENST00000550659 ZIC2O95409 532 aaPredicted RBP8.62□□□□□ -1.03
PRDM4-206ENST00000550659 PDGFAP04085 211 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 DAB2P98082 770 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 ENOX2Q16206 610 aaKnown RBP8.62□□□□□ -1.03
PRDM4-206ENST00000550659 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 ZNF598Q86UK7 904 aaKnown RBP8.62□□□□□ -1.03
PRDM4-206ENST00000550659 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
PRDM4-206ENST00000550659 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 EDEM1Q92611 657 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 KLK14Q9P0G3 267 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 ASXL2Q76L83 1435 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 KIF14Q15058 1648 aa8.62□□□□□ -1.03
PRDM4-206ENST00000550659 GTF2E1P29083 439 aaPredicted RBP8.61□□□□□ -1.03
PRDM4-206ENST00000550659 GPC1P35052 558 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
PRDM4-206ENST00000550659 LDLRAD1Q5T700 205 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 ALG1LQ6GMV1 187 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
PRDM4-206ENST00000550659 AGBL1Q96MI9 1066 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 NIF3L1Q9GZT8 377 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 PKD2L1Q9P0L9 805 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
PRDM4-206ENST00000550659 CCDC18Q5T9S5 1454 aa8.6□□□□□ -1.03
PRDM4-206ENST00000550659 SORBS3O60504 671 aa8.6□□□□□ -1.03
PRDM4-206ENST00000550659 PCSK2P16519 638 aa8.6□□□□□ -1.03
PRDM4-206ENST00000550659 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
PRDM4-206ENST00000550659 RELBQ01201 579 aa8.6□□□□□ -1.03
PRDM4-206ENST00000550659 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
PRDM4-206ENST00000550659 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
PRDM4-206ENST00000550659 WWC3Q9ULE0 1092 aa8.6□□□□□ -1.03
PRDM4-206ENST00000550659 MAPKBP1O60336 1514 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 LRRC9Q6ZRR7 1453 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 PNMA6FA0A0J9YX94 578 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 TIMP2P16035 220 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 ERCC5P28715 1186 aaPredicted RBP8.59□□□□□ -1.03
PRDM4-206ENST00000550659 HDLBPQ00341 1268 aaKnown RBP8.59□□□□□ -1.03
PRDM4-206ENST00000550659 PSMD2Q13200 908 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 HIF1AQ16665 826 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 FBF1Q8TES7 1133 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 DRC1Q96MC2 740 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 FAM161BQ96MY7 647 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 FAM13BQ9NYF5 915 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
PRDM4-206ENST00000550659 WDR7Q9Y4E6 1490 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
PRDM4-206ENST00000550659 FOXC1Q12948 553 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 GNASQ5JWF2 1037 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 TMEM87AQ8NBN3 555 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 GRIP2Q9C0E4 1043 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 ZNF395Q9H8N7 513 aaPredicted RBP8.58□□□□□ -1.04
PRDM4-206ENST00000550659 METTL5Q9NRN9 209 aaKnown RBP8.58□□□□□ -1.04
PRDM4-206ENST00000550659 KIF13AQ9H1H9 1805 aa8.58□□□□□ -1.04
PRDM4-206ENST00000550659 TTC37Q6PGP7 1564 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 DIP2BQ9P265 1576 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
PRDM4-206ENST00000550659 NEFLP07196 543 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 GNA15P30679 374 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 TXLNAP40222 546 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 NAALADL2Q58DX5 795 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 SPNS2Q8IVW8 549 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 FRMD6Q96NE9 622 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 CSRNP1Q96S65 589 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 RNF19AQ9NV58 838 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 VTI1BQ9UEU0 232 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
PRDM4-206ENST00000550659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.56□□□□□ -1.04
PRDM4-206ENST00000550659 TGFBR3LH3BV60 316 aa8.56□□□□□ -1.04
PRDM4-206ENST00000550659 RNF144AP50876 292 aaPredicted RBP8.56□□□□□ -1.04
PRDM4-206ENST00000550659 GPR152Q8TDT2 470 aa8.56□□□□□ -1.04
PRDM4-206ENST00000550659 NUDT16Q96DE0 195 aaKnown RBP8.56□□□□□ -1.04
PRDM4-206ENST00000550659 DNAJC25Q9H1X3 360 aa8.56□□□□□ -1.04
PRDM4-206ENST00000550659 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
PRDM4-206ENST00000550659 BCS1LQ9Y276 419 aa8.56□□□□□ -1.04
PRDM4-206ENST00000550659 GPC6Q9Y625 555 aaPredicted RBP8.56□□□□□ -1.04
PRDM4-206ENST00000550659 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
PRDM4-206ENST00000550659 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
PRDM4-206ENST00000550659 J3QL48 77 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms