RNA–Protein interactions for RNA: ENST00000550638.5

CCT2-210, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 683 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-210ENST00000550638 MCM10Q7L590 875 aa13.75□□□□□ -0.21
CCT2-210ENST00000550638 SLC51AQ86UW1 340 aa13.75□□□□□ -0.21
CCT2-210ENST00000550638 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
CCT2-210ENST00000550638 NUP98P52948 1817 aa13.75□□□□□ -0.21
CCT2-210ENST00000550638 LTBP1Q14766 1721 aa13.75□□□□□ -0.21
CCT2-210ENST00000550638 FAM177BA6PVY3 158 aa13.74□□□□□ -0.21
CCT2-210ENST00000550638 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
CCT2-210ENST00000550638 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCT2-210ENST00000550638 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
CCT2-210ENST00000550638 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
CCT2-210ENST00000550638 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
CCT2-210ENST00000550638 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
CCT2-210ENST00000550638 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
CCT2-210ENST00000550638 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 ABCC12Q96J65 1359 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 EAPPQ56P03 285 aaPredicted RBP13.73□□□□□ -0.21
CCT2-210ENST00000550638 CC2D2BQ6DHV5 1058 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
CCT2-210ENST00000550638 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCT2-210ENST00000550638 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
CCT2-210ENST00000550638 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
CCT2-210ENST00000550638 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
CCT2-210ENST00000550638 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
CCT2-210ENST00000550638 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
CCT2-210ENST00000550638 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
CCT2-210ENST00000550638 NEFMP07197 916 aa13.71□□□□□ -0.21
CCT2-210ENST00000550638 VEGFBP49765 207 aa13.71□□□□□ -0.21
CCT2-210ENST00000550638 CRY2Q49AN0 593 aa13.71□□□□□ -0.21
CCT2-210ENST00000550638 PSMD1Q99460 953 aa13.71□□□□□ -0.21
CCT2-210ENST00000550638 FZD9O00144 591 aa13.7□□□□□ -0.22
CCT2-210ENST00000550638 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
CCT2-210ENST00000550638 HLFQ16534 295 aa13.7□□□□□ -0.22
CCT2-210ENST00000550638 GPC2Q8N158 579 aa13.7□□□□□ -0.22
CCT2-210ENST00000550638 HACL1Q9UJ83 578 aa13.7□□□□□ -0.22
CCT2-210ENST00000550638 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
CCT2-210ENST00000550638 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
CCT2-210ENST00000550638 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
CCT2-210ENST00000550638 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
CCT2-210ENST00000550638 NUBP1P53384 320 aa13.69□□□□□ -0.22
CCT2-210ENST00000550638 MAP1SQ66K74 1059 aaPredicted RBP13.69□□□□□ -0.22
CCT2-210ENST00000550638 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
CCT2-210ENST00000550638 TRPM7Q96QT4 1865 aa13.69□□□□□ -0.22
CCT2-210ENST00000550638 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 EPHX2P34913 555 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
CCT2-210ENST00000550638 PRDM10Q9NQV6 1147 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
CCT2-210ENST00000550638 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
CCT2-210ENST00000550638 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■□□□□ 10.3
CCT2-210ENST00000550638 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
CCT2-210ENST00000550638 VPS33BQ9H267 617 aa13.67□□□□□ -0.22
CCT2-210ENST00000550638 LAMB2P55268 1798 aa13.66□□□□□ -0.22
CCT2-210ENST00000550638 LBX1P52954 281 aa13.66□□□□□ -0.22
CCT2-210ENST00000550638 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
CCT2-210ENST00000550638 NGEFQ8N5V2 710 aa13.66□□□□□ -0.22
CCT2-210ENST00000550638 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
CCT2-210ENST00000550638 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
CCT2-210ENST00000550638 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
CCT2-210ENST00000550638 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
CCT2-210ENST00000550638 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
CCT2-210ENST00000550638 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
CCT2-210ENST00000550638 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
CCT2-210ENST00000550638 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
CCT2-210ENST00000550638 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
CCT2-210ENST00000550638 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
CCT2-210ENST00000550638 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
CCT2-210ENST00000550638 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
CCT2-210ENST00000550638 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
CCT2-210ENST00000550638 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
CCT2-210ENST00000550638 TAF1P21675 1872 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
CCT2-210ENST00000550638 GPTP24298 496 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 NFE2L2Q16236 605 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
CCT2-210ENST00000550638 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 C3orf67Q6ZVT6 689 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
CCT2-210ENST00000550638 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
CCT2-210ENST00000550638 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
CCT2-210ENST00000550638 TAOK2Q9UL54 1235 aa13.63□□□□□ -0.23
CCT2-210ENST00000550638 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
CCT2-210ENST00000550638 LMOD1P29536 600 aaPredicted RBP13.62□□□□□ -0.23
CCT2-210ENST00000550638 EPS15P42566 896 aa13.62□□□□□ -0.23
CCT2-210ENST00000550638 SCNN1DP51172 638 aa13.62□□□□□ -0.23
CCT2-210ENST00000550638 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
CCT2-210ENST00000550638 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
CCT2-210ENST00000550638 ABT1Q9ULW3 272 aaKnown RBP13.62□□□□□ -0.23
CCT2-210ENST00000550638 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms