RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ATAD2Q6PL18 1390 aa6.13□□□□□ -1.43
CCNT1-203ENST00000550457 RASA1P20936 1047 aa6.12□□□□□ -1.43
CCNT1-203ENST00000550457 TRIM28Q13263 835 aaKnown RBP6.12□□□□□ -1.43
CCNT1-203ENST00000550457 NEUROD1Q13562 356 aa6.12□□□□□ -1.43
CCNT1-203ENST00000550457 ZMYM1Q5SVZ6 1142 aa6.12□□□□□ -1.43
CCNT1-203ENST00000550457 STAG2Q8N3U4 1231 aa6.12□□□□□ -1.43
CCNT1-203ENST00000550457 GAS2L2Q8NHY3 880 aa6.12□□□□□ -1.43
CCNT1-203ENST00000550457 SCG3Q8WXD2 468 aaKnown RBP6.12□□□□□ -1.43
CCNT1-203ENST00000550457 DYRK3O43781 588 aa6.11□□□□□ -1.43
CCNT1-203ENST00000550457 LGR5O75473 907 aa6.11□□□□□ -1.43
CCNT1-203ENST00000550457 FNBP4Q8N3X1 1017 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-203ENST00000550457 CHMP7Q8WUX9 453 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-203ENST00000550457 NGLY1Q96IV0 654 aa6.11□□□□□ -1.43
CCNT1-203ENST00000550457 TFIP11Q9UBB9 837 aaKnown RBP6.11□□□□□ -1.43
CCNT1-203ENST00000550457 SLC6A14Q9UN76 642 aa6.11□□□□□ -1.43
CCNT1-203ENST00000550457 BCS1LQ9Y276 419 aa6.11□□□□□ -1.43
CCNT1-203ENST00000550457 MAFBQ9Y5Q3 323 aaPredicted RBP6.11□□□□□ -1.43
CCNT1-203ENST00000550457 SELPP16109 830 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 GRNP28799 593 aaKnown RBP6.1□□□□□ -1.43
CCNT1-203ENST00000550457 SEC13P55735 322 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 TBC1D8BQ0IIM8 1120 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 GLMNQ92990 594 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 CLUAP1Q96AJ1 413 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 GSX2Q9BZM3 304 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 UBE2OQ9C0C9 1292 aaKnown RBP6.1□□□□□ -1.43
CCNT1-203ENST00000550457 IGFLR1Q9H665 355 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 DMGDHQ9UI17 866 aaKnown RBP6.1□□□□□ -1.43
CCNT1-203ENST00000550457 NAGPAQ9UK23 515 aa6.1□□□□□ -1.43
CCNT1-203ENST00000550457 A0A0A0MRY4 1105 aa6.09□□□□□ -1.43
CCNT1-203ENST00000550457 LILRB5O75023 590 aa6.09□□□□□ -1.43
CCNT1-203ENST00000550457 CRTC2Q53ET0 693 aaPredicted RBP6.09□□□□□ -1.43
CCNT1-203ENST00000550457 ILDR2Q71H61 639 aa6.09□□□□□ -1.43
CCNT1-203ENST00000550457 KRTAP1-3Q8IUG1 177 aa6.09□□□□□ -1.43
CCNT1-203ENST00000550457 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
CCNT1-203ENST00000550457 MBTPS1Q14703 1052 aa6.08□□□□□ -1.44
CCNT1-203ENST00000550457 NUDT8Q8WV74 236 aa6.08□□□□□ -1.44
CCNT1-203ENST00000550457 NACC1Q96RE7 527 aa6.08□□□□□ -1.44
CCNT1-203ENST00000550457 RBM19Q9Y4C8 960 aaKnown RBP6.08□□□□□ -1.44
CCNT1-203ENST00000550457 TGFBR3LH3BV60 316 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 NFKB1P19838 968 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 AFF1P51825 1210 aaKnown RBP6.07□□□□□ -1.44
CCNT1-203ENST00000550457 DPYDQ12882 1025 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 PTK7Q13308 1070 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 ADGRE1Q14246 886 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 RTN1Q16799 776 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 KANK4Q5T7N3 995 aaPredicted RBP6.07□□□□□ -1.44
CCNT1-203ENST00000550457 IER5Q5VY09 327 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 PSAPL1Q6NUJ1 521 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 SHISA2Q6UWI4 295 aa6.07□□□□□ -1.44
CCNT1-203ENST00000550457 PROSER2Q86WR7 435 aaPredicted RBP6.07□□□□□ -1.44
CCNT1-203ENST00000550457 JPH1Q9HDC5 661 aaPredicted RBP6.07□□□□□ -1.44
CCNT1-203ENST00000550457 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.07□□□□□ -1.44
CCNT1-203ENST00000550457 ELNP15502 786 aa6.06□□□□□ -1.44
CCNT1-203ENST00000550457 CCINQ13939 588 aa6.06□□□□□ -1.44
CCNT1-203ENST00000550457 HIF1AQ16665 826 aa6.06□□□□□ -1.44
CCNT1-203ENST00000550457 PRSS36Q5K4E3 855 aa6.06□□□□□ -1.44
CCNT1-203ENST00000550457 HINFPQ9BQA5 517 aa6.06□□□□□ -1.44
CCNT1-203ENST00000550457 C9orf172C9J069 976 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 IGFBP4P22692 258 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 INPP5BP32019 993 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 PLAURQ03405 335 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 LARP1Q6PKG0 1096 aaKnown RBP6.05□□□□□ -1.44
CCNT1-203ENST00000550457 LENG1Q96BZ8 264 aaPredicted RBP6.05□□□□□ -1.44
CCNT1-203ENST00000550457 PPP1R12CQ9BZL4 782 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 EFCC1Q9HA90 598 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 KLK14Q9P0G3 267 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 ZFATQ9P243 1243 aa6.05□□□□□ -1.44
CCNT1-203ENST00000550457 ZBTB42B2RXF5 422 aa6.04□□□□□ -1.44
CCNT1-203ENST00000550457 RAC1P63000 192 aa6.04□□□□□ -1.44
CCNT1-203ENST00000550457 TXNRD3Q86VQ6 643 aa6.04□□□□□ -1.44
CCNT1-203ENST00000550457 DMRTC2Q8IXT2 367 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-203ENST00000550457 FMR1NBQ8N0W7 255 aaPredicted RBP6.04□□□□□ -1.44
CCNT1-203ENST00000550457 SCO2A0A1W2PP80 73 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L15C9J2P7 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L10C9JJH3 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L13C9JLJ4 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L12C9JPN9 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L11C9JVI0 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L21D6R901 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L18D6R9N7 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L22D6RA61 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L17D6RBQ6 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L19D6RCP7 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L20D6RJB6 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 RGS9O75916 674 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-203ENST00000550457 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 IDH3AP50213 366 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 USP17L24Q0WX57 530 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 GRIK5Q16478 980 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 FAM35AQ86V20 835 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 ANKMY2Q8IV38 441 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 PNMA5Q96PV4 448 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 ARXQ96QS3 562 aa6.03□□□□□ -1.44
CCNT1-203ENST00000550457 SSBP4Q9BWG4 385 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-203ENST00000550457 QTRT2Q9H974 415 aaKnown RBP6.03□□□□□ -1.44
CCNT1-203ENST00000550457 FAM196BA6NMK8 535 aa6.02□□□□□ -1.45
CCNT1-203ENST00000550457 MAP3K6O95382 1288 aa6.02□□□□□ -1.45
CCNT1-203ENST00000550457 CPB1P15086 417 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms