RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 PARP10Q53GL7 1025 aa14.57□□□□□ -0.08
CNOT2-223ENST00000550160 DEFB132Q7Z7B7 95 aa14.57□□□□□ -0.08
CNOT2-223ENST00000550160 ISCA1Q9BUE6 129 aa14.57□□□□□ -0.08
CNOT2-223ENST00000550160 USP44Q9H0E7 712 aa14.57□□□□□ -0.08
CNOT2-223ENST00000550160 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
CNOT2-223ENST00000550160 USPL1Q5W0Q7 1092 aa14.56□□□□□ -0.08
CNOT2-223ENST00000550160 NIP7Q9Y221 180 aaKnown RBP eCLIP14.56□□□□□ -0.08
CNOT2-223ENST00000550160 UBR3Q6ZT12 1888 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 GPTP24298 496 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 ZNF827Q17R98 1081 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 PPP1R42Q7Z4L9 355 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 UTYO14607 1347 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 BCORQ6W2J9 1755 aa14.55□□□□□ -0.08
CNOT2-223ENST00000550160 HSP90B1P14625 803 aaKnown RBP14.54□□□□□ -0.08
CNOT2-223ENST00000550160 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
CNOT2-223ENST00000550160 SLC15A2Q16348 729 aa14.54□□□□□ -0.08
CNOT2-223ENST00000550160 NLRP10Q86W26 655 aa14.54□□□□□ -0.08
CNOT2-223ENST00000550160 ZNF34Q8IZ26 560 aa14.54□□□□□ -0.08
CNOT2-223ENST00000550160 SRP68Q9UHB9 627 aaKnown RBP14.54□□□□□ -0.08
CNOT2-223ENST00000550160 ABCB7O75027 752 aa14.53□□□□□ -0.08
CNOT2-223ENST00000550160 HMMRO75330 724 aa14.53□□□□□ -0.08
CNOT2-223ENST00000550160 PCCAP05165 728 aaPredicted RBP14.53□□□□□ -0.08
CNOT2-223ENST00000550160 NBPF7P0C2Y1 421 aaPredicted RBP14.53□□□□□ -0.08
CNOT2-223ENST00000550160 SMIM5Q71RC9 77 aa14.53□□□□□ -0.08
CNOT2-223ENST00000550160 UBE3BQ7Z3V4 1068 aa14.53□□□□□ -0.08
CNOT2-223ENST00000550160 RPAP2Q8IXW5 612 aaPredicted RBP14.53□□□□□ -0.08
CNOT2-223ENST00000550160 ZBTB38Q8NAP3 1195 aaPredicted RBP14.53□□□□□ -0.08
CNOT2-223ENST00000550160 UPF1Q92900 1129 aaKnown RBP eCLIP14.53□□□□□ -0.08
CNOT2-223ENST00000550160 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
CNOT2-223ENST00000550160 C1orf115Q9H7X2 142 aa14.53□□□□□ -0.08
CNOT2-223ENST00000550160 AFDNP55196 1824 aaKnown RBP14.52□□□□□ -0.08
CNOT2-223ENST00000550160 ANKRD36CQ5JPF3 1778 aa14.52□□□□□ -0.08
CNOT2-223ENST00000550160 H7C1W4 665 aa14.52□□□□□ -0.09
CNOT2-223ENST00000550160 AMIGO3Q86WK7 504 aa14.52□□□□□ -0.09
CNOT2-223ENST00000550160 SETDB2Q96T68 719 aa14.52□□□□□ -0.09
CNOT2-223ENST00000550160 UTP14AQ9BVJ6 771 aaKnown RBP14.52□□□□□ -0.09
CNOT2-223ENST00000550160 TRMT112Q9UI30 125 aaKnown RBP14.52□□□□□ -0.09
CNOT2-223ENST00000550160 LRRFIP2Q9Y608 721 aaKnown RBP14.52□□□□□ -0.09
CNOT2-223ENST00000550160 NUP98P52948 1817 aa14.52□□□□□ -0.09
CNOT2-223ENST00000550160 C4AP0C0L4 1744 aa14.52□□□□□ -0.09
CNOT2-223ENST00000550160 UBN2Q6ZU65 1347 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 PNPLA7Q6ZV29 1317 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 B4GALNT3Q6L9W6 998 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 NYXQ9GZU5 481 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 BCL2L12Q9HB09 334 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
CNOT2-223ENST00000550160 PCDHB15Q9Y5E8 787 aa14.51□□□□□ -0.09
CNOT2-223ENST00000550160 CARMIL3Q8ND23 1372 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 CDHR2Q9BYE9 1310 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 NPHP1O15259 732 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 GYS1P13807 737 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 GTF2E1P29083 439 aaPredicted RBP14.5□□□□□ -0.09
CNOT2-223ENST00000550160 HDAC1Q13547 482 aaPredicted RBP14.5□□□□□ -0.09
CNOT2-223ENST00000550160 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 CEP85Q6P2H3 762 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 BICDL1Q6ZP65 573 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 CENPQQ7L2Z9 268 aaPredicted RBP14.5□□□□□ -0.09
CNOT2-223ENST00000550160 COL23A1Q86Y22 540 aaPredicted RBP14.5□□□□□ -0.09
CNOT2-223ENST00000550160 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 ANKRD44Q8N8A2 993 aa14.5□□□□□ -0.09
CNOT2-223ENST00000550160 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
CNOT2-223ENST00000550160 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
CNOT2-223ENST00000550160 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
CNOT2-223ENST00000550160 FAM177BA6PVY3 158 aa14.48□□□□□ -0.09
CNOT2-223ENST00000550160 CASP7P55210 303 aa14.48□□□□□ -0.09
CNOT2-223ENST00000550160 ATP8B2P98198 1209 aa14.48□□□□□ -0.09
CNOT2-223ENST00000550160 TPTE2Q6XPS3 522 aa14.48□□□□□ -0.09
CNOT2-223ENST00000550160 NBPF5PQ86XG9 351 aaPredicted RBP14.48□□□□□ -0.09
CNOT2-223ENST00000550160 FAM89AQ96GI7 184 aa14.48□□□□□ -0.09
CNOT2-223ENST00000550160 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
CNOT2-223ENST00000550160 IRS4O14654 1257 aaPredicted RBP14.47□□□□□ -0.09
CNOT2-223ENST00000550160 NTSR2O95665 410 aa14.47□□□□□ -0.09
CNOT2-223ENST00000550160 MTX1Q13505 466 aa14.47□□□□□ -0.09
CNOT2-223ENST00000550160 NFIXQ14938 502 aa14.47□□□□□ -0.09
CNOT2-223ENST00000550160 JARID2Q92833 1246 aaPredicted RBP14.47□□□□□ -0.09
CNOT2-223ENST00000550160 PLA2G12BQ9BX93 195 aa14.47□□□□□ -0.09
CNOT2-223ENST00000550160 QSER1Q2KHR3 1735 aa14.46□□□□□ -0.09
CNOT2-223ENST00000550160 TUBGCP6Q96RT7 1819 aa14.46□□□□□ -0.09
CNOT2-223ENST00000550160 EP400Q96L91 3159 aa14.46□□□□□ -0.09
CNOT2-223ENST00000550160 SRGAP3O43295 1099 aa14.46□□□□□ -0.09
CNOT2-223ENST00000550160 PDE8AO60658 829 aa14.46□□□□□ -0.09
CNOT2-223ENST00000550160 RABL6Q3YEC7 729 aaPredicted RBP14.45□□□□□ -0.1
CNOT2-223ENST00000550160 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
CNOT2-223ENST00000550160 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
CNOT2-223ENST00000550160 GCC1Q96CN9 775 aa14.45□□□□□ -0.1
CNOT2-223ENST00000550160 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
CNOT2-223ENST00000550160 CHMP3Q9Y3E7 222 aa14.45□□□□□ -0.1
CNOT2-223ENST00000550160 PNMA6EA0A0J9YXQ4 647 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 IGHDP01880 384 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 CTSWP56202 376 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 ST5P78524 1137 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 SIRT2Q8IXJ6 389 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 SSH3Q8TE77 659 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 PARP3Q9Y6F1 533 aa14.44□□□□□ -0.1
CNOT2-223ENST00000550160 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms