RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 CDK2AP1O14519 115 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 RHOQP17081 205 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 TATP17735 454 aaPredicted RBP4.87□□□□□ -1.63
RAB5B-207ENST00000549915 SRSF11Q05519 484 aaKnown RBP4.87□□□□□ -1.63
RAB5B-207ENST00000549915 NCOA4Q13772 614 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 BECN1Q14457 450 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 MTFR1Q15390 333 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 USP17L2Q6R6M4 530 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 RIPOR1Q6ZS17 1223 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 USP17L1Q7RTZ2 530 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 FNBP4Q8N3X1 1017 aaPredicted RBP4.87□□□□□ -1.63
RAB5B-207ENST00000549915 LARGE2Q8N3Y3 721 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 NGEFQ8N5V2 710 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 GLMNQ92990 594 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 CALR3Q96L12 384 aaKnown RBP4.87□□□□□ -1.63
RAB5B-207ENST00000549915 CARD11Q9BXL7 1154 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 NUCKS1Q9H1E3 243 aaKnown RBP4.87□□□□□ -1.63
RAB5B-207ENST00000549915 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 PDS5BQ9NTI5 1447 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 ANKRD50Q9ULJ7 1429 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 ABCC10Q5T3U5 1492 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 PLXNC1O60486 1568 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 ARHGEF5Q12774 1597 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 PALM3A6NDB9 673 aaPredicted RBP4.86□□□□□ -1.63
RAB5B-207ENST00000549915 SCNN1DP51172 638 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 AAMPQ13685 434 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 VWA5B2Q8N398 1253 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 ZNF837Q96EG3 531 aaPredicted RBP4.86□□□□□ -1.63
RAB5B-207ENST00000549915 CRBNQ96SW2 442 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 GAS2L1Q99501 681 aaPredicted RBP4.86□□□□□ -1.63
RAB5B-207ENST00000549915 CFHR5Q9BXR6 569 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 COL25A1Q9BXS0 654 aaPredicted RBP4.86□□□□□ -1.63
RAB5B-207ENST00000549915 ENAMQ9NRM1 1142 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 MBIPQ9NS73 344 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 LRRC4BQ9NT99 713 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 ISY1Q9ULR0 285 aaKnown RBP4.86□□□□□ -1.63
RAB5B-207ENST00000549915 MAPK8IP3Q9UPT6 1336 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 ABCC2Q92887 1545 aa4.86□□□□□ -1.63
RAB5B-207ENST00000549915 RNF17Q9BXT8 1623 aaKnown RBP4.86□□□□□ -1.63
RAB5B-207ENST00000549915 A6NJY4 79 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 POM121CA8CG34 1229 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 PIK3CDO00329 1044 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 MAP2K3P46734 347 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 MAP3K10Q02779 954 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 C8orf34Q49A92 452 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 C4orf17Q53FE4 359 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 NLRP8Q86W28 1048 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 CLUAP1Q96AJ1 413 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 CRISPLD1Q9H336 500 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 DNAAF2Q9NVR5 837 aaKnown RBP4.85□□□□□ -1.63
RAB5B-207ENST00000549915 PCDHGA11Q9Y5H2 935 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 TDRD9Q8NDG6 1382 aaKnown RBP4.85□□□□□ -1.63
RAB5B-207ENST00000549915 PIK3C2GO75747 1445 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 CCDC141Q6ZP82 1450 aa4.85□□□□□ -1.63
RAB5B-207ENST00000549915 GPATCH8Q9UKJ3 1502 aaKnown RBP4.85□□□□□ -1.63
RAB5B-207ENST00000549915 CDC42BPAQ5VT25 1732 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 UNC13BO14795 1591 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 SYNMO15061 1565 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 DISP1Q96F81 1524 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 SYNJ2O15056 1496 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 C9orf84Q5VXU9 1444 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 SCAPERQ9BY12 1400 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 NPC1L1Q9UHC9 1359 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 EIF5BO60841 1220 aaKnown RBP4.84□□□□□ -1.63
RAB5B-207ENST00000549915 SLURP2P0DP57 97 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 HIF1AQ16665 826 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 TSGA10IPQ3SY00 556 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 LCE2CQ5TA81 110 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 LARP1Q6PKG0 1096 aaKnown RBP4.84□□□□□ -1.63
RAB5B-207ENST00000549915 SIX5Q8N196 739 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 GAS2L2Q8NHY3 880 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 CNTNAP3BQ96NU0 1288 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 CNTNAP3Q9BZ76 1288 aa4.84□□□□□ -1.63
RAB5B-207ENST00000549915 ATXN7L1Q9ULK2 861 aaPredicted RBP4.84□□□□□ -1.63
RAB5B-207ENST00000549915 ATP10AO60312 1499 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 ERBINQ96RT1 1412 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 CGNL1Q0VF96 1302 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 ZNF521Q96K83 1311 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 ST20-MTHFSA0A0A6YYL1 179 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 TMEM229AB2RXF0 380 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 RRP9O43818 475 aaKnown RBP4.83□□□□□ -1.64
RAB5B-207ENST00000549915 PLA2G4AP47712 749 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 ADAMTS19Q8TE59 1207 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 UCN2Q96RP3 112 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 POLR3GLQ9BT43 218 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 ZNF358Q9NW07 568 aa4.83□□□□□ -1.64
RAB5B-207ENST00000549915 SCHIP1Q9P0W5 487 aaPredicted RBP4.83□□□□□ -1.64
RAB5B-207ENST00000549915 MKRN1Q9UHC7 482 aaKnown RBP4.83□□□□□ -1.64
RAB5B-207ENST00000549915 MAFBQ9Y5Q3 323 aaPredicted RBP4.83□□□□□ -1.64
RAB5B-207ENST00000549915 MAST1Q9Y2H9 1570 aa4.82□□□□□ -1.64
RAB5B-207ENST00000549915 FAM135AQ9P2D6 1515 aa4.82□□□□□ -1.64
RAB5B-207ENST00000549915 NKTRP30414 1462 aaKnown RBP4.82□□□□□ -1.64
RAB5B-207ENST00000549915 NLRP1Q9C000 1473 aa4.82□□□□□ -1.64
RAB5B-207ENST00000549915 NUP155O75694 1391 aa4.82□□□□□ -1.64
RAB5B-207ENST00000549915 FRAT2O75474 233 aaPredicted RBP4.82□□□□□ -1.64
RAB5B-207ENST00000549915 MX2P20592 715 aa4.82□□□□□ -1.64
RAB5B-207ENST00000549915 MSX1P28360 303 aa4.82□□□□□ -1.64
RAB5B-207ENST00000549915 PSMA6P60900 246 aaKnown RBP4.82□□□□□ -1.64
RAB5B-207ENST00000549915 TEAD4Q15561 434 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms