RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TNS4Q8IZW8 715 aa7.95□□□□□ -1.14
SNRPF-202ENST00000549580 C1orf115Q9H7X2 142 aa7.95□□□□□ -1.14
SNRPF-202ENST00000549580 SLC6A14Q9UN76 642 aa7.95□□□□□ -1.14
SNRPF-202ENST00000549580 ZNF232Q9UNY5 417 aa7.95□□□□□ -1.14
SNRPF-202ENST00000549580 TEAD4Q15561 434 aa7.94□□□□□ -1.14
SNRPF-202ENST00000549580 SLC51AQ86UW1 340 aa7.94□□□□□ -1.14
SNRPF-202ENST00000549580 SLC9A9Q8IVB4 645 aa7.94□□□□□ -1.14
SNRPF-202ENST00000549580 DMRTC2Q8IXT2 367 aaPredicted RBP7.94□□□□□ -1.14
SNRPF-202ENST00000549580 NUDT8Q8WV74 236 aa7.94□□□□□ -1.14
SNRPF-202ENST00000549580 HSH2DQ96JZ2 352 aa7.94□□□□□ -1.14
SNRPF-202ENST00000549580 NEUROD4Q9HD90 331 aa7.94□□□□□ -1.14
SNRPF-202ENST00000549580 KIAA1324LA8MWY0 1029 aaPredicted RBP7.93□□□□□ -1.14
SNRPF-202ENST00000549580 FSTP19883 344 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 EPHA4P54764 986 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 TBC1D8BQ0IIM8 1120 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 SEMA3FQ13275 785 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 MCM6Q14566 821 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 BRD7Q9NPI1 651 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 NAGPAQ9UK23 515 aa7.93□□□□□ -1.14
SNRPF-202ENST00000549580 MED26O95402 600 aa7.92□□□□□ -1.14
SNRPF-202ENST00000549580 GTF2IP78347 998 aa7.92□□□□□ -1.14
SNRPF-202ENST00000549580 IGFLR1Q9H665 355 aa7.92□□□□□ -1.14
SNRPF-202ENST00000549580 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 BACH1O14867 736 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 GP2P55259 537 aaKnown RBP7.91□□□□□ -1.14
SNRPF-202ENST00000549580 PSME1Q06323 249 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 FBXO11Q86XK2 927 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 DTWD1Q8N5C7 304 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 UBE2OQ9C0C9 1292 aaKnown RBP7.91□□□□□ -1.14
SNRPF-202ENST00000549580 HCN4Q9Y3Q4 1203 aa7.91□□□□□ -1.14
SNRPF-202ENST00000549580 SKIP12755 728 aa7.9□□□□□ -1.14
SNRPF-202ENST00000549580 UBTFP17480 764 aaKnown RBP7.9□□□□□ -1.14
SNRPF-202ENST00000549580 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.14
SNRPF-202ENST00000549580 BHMTQ93088 406 aa7.9□□□□□ -1.14
SNRPF-202ENST00000549580 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
SNRPF-202ENST00000549580 SERTM1A2A2V5 107 aa7.89□□□□□ -1.15
SNRPF-202ENST00000549580 TYRO3Q06418 890 aa7.89□□□□□ -1.15
SNRPF-202ENST00000549580 EML3Q32P44 896 aa7.89□□□□□ -1.15
SNRPF-202ENST00000549580 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
SNRPF-202ENST00000549580 DZIP1LQ8IYY4 767 aaKnown RBP7.89□□□□□ -1.15
SNRPF-202ENST00000549580 KCNH4Q9UQ05 1017 aa7.89□□□□□ -1.15
SNRPF-202ENST00000549580 NOD1Q9Y239 953 aa7.89□□□□□ -1.15
SNRPF-202ENST00000549580 JAG1P78504 1218 aa7.88□□□□□ -1.15
SNRPF-202ENST00000549580 NCOA4Q13772 614 aa7.88□□□□□ -1.15
SNRPF-202ENST00000549580 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
SNRPF-202ENST00000549580 CLUAP1Q96AJ1 413 aa7.88□□□□□ -1.15
SNRPF-202ENST00000549580 ARID3CA6NKF2 412 aa7.87□□□□□ -1.15
SNRPF-202ENST00000549580 GRIK5Q16478 980 aa7.87□□□□□ -1.15
SNRPF-202ENST00000549580 IGF2-ASQ6U949 168 aa7.87□□□□□ -1.15
SNRPF-202ENST00000549580 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
SNRPF-202ENST00000549580 PHACTR1Q9C0D0 580 aa7.86□□□□□ -1.15
SNRPF-202ENST00000549580 TSPAN10Q9H1Z9 355 aaPredicted RBP7.86□□□□□ -1.15
SNRPF-202ENST00000549580 KIAA1024Q9UPX6 916 aa7.86□□□□□ -1.15
SNRPF-202ENST00000549580 ADAMTS4O75173 837 aa7.85□□□□□ -1.15
SNRPF-202ENST00000549580 SUSD3Q96L08 255 aa7.85□□□□□ -1.15
SNRPF-202ENST00000549580 DNAJB12Q9NXW2 375 aaKnown RBP7.85□□□□□ -1.15
SNRPF-202ENST00000549580 RGS9O75916 674 aaPredicted RBP7.84□□□□□ -1.15
SNRPF-202ENST00000549580 FNBP4Q8N3X1 1017 aaPredicted RBP7.84□□□□□ -1.15
SNRPF-202ENST00000549580 ZBTB7BO15156 539 aaPredicted RBP7.83□□□□□ -1.16
SNRPF-202ENST00000549580 TGFB1P01137 390 aa7.83□□□□□ -1.16
SNRPF-202ENST00000549580 TPCN2Q8NHX9 752 aa7.83□□□□□ -1.16
SNRPF-202ENST00000549580 EFCC1Q9HA90 598 aa7.83□□□□□ -1.16
SNRPF-202ENST00000549580 DEAF1O75398 565 aaPredicted RBP7.82□□□□□ -1.16
SNRPF-202ENST00000549580 C1orf53Q5VUE5 145 aa7.82□□□□□ -1.16
SNRPF-202ENST00000549580 POTEAQ6S8J7 498 aa7.82□□□□□ -1.16
SNRPF-202ENST00000549580 PROSER2Q86WR7 435 aaPredicted RBP7.82□□□□□ -1.16
SNRPF-202ENST00000549580 POM121Q96HA1 1249 aa7.82□□□□□ -1.16
SNRPF-202ENST00000549580 ARID3AQ99856 593 aa7.82□□□□□ -1.16
SNRPF-202ENST00000549580 SPINK2P20155 84 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 SOX11P35716 441 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 HIRAP54198 1017 aaPredicted RBP7.81□□□□□ -1.16
SNRPF-202ENST00000549580 PLAURQ03405 335 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 LCE4AQ5TA78 99 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 KRTAP4-11Q9BYQ6 195 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
SNRPF-202ENST00000549580 DLL1O00548 723 aa7.8□□□□□ -1.16
SNRPF-202ENST00000549580 RAD21O60216 631 aa7.8□□□□□ -1.16
SNRPF-202ENST00000549580 PSMA6P60900 246 aaKnown RBP7.8□□□□□ -1.16
SNRPF-202ENST00000549580 ALG2Q9H553 416 aa7.8□□□□□ -1.16
SNRPF-202ENST00000549580 AKTIPQ9H8T0 292 aa7.8□□□□□ -1.16
SNRPF-202ENST00000549580 FRRS1LQ9P0K9 344 aa7.8□□□□□ -1.16
SNRPF-202ENST00000549580 COG6Q9Y2V7 657 aa7.8□□□□□ -1.16
SNRPF-202ENST00000549580 USP17L5A8MUK1 530 aa7.79□□□□□ -1.16
SNRPF-202ENST00000549580 CLDN10P78369 228 aa7.79□□□□□ -1.16
SNRPF-202ENST00000549580 CCDC102BQ68D86 513 aa7.79□□□□□ -1.16
SNRPF-202ENST00000549580 Q6ZS46 218 aa7.79□□□□□ -1.16
SNRPF-202ENST00000549580 BTLAQ7Z6A9 289 aa7.79□□□□□ -1.16
SNRPF-202ENST00000549580 GSX2Q9BZM3 304 aa7.79□□□□□ -1.16
SNRPF-202ENST00000549580 ALX3O95076 343 aa7.78□□□□□ -1.16
SNRPF-202ENST00000549580 IGLV1-40P01703 118 aa7.78□□□□□ -1.16
SNRPF-202ENST00000549580 CCDC82Q8N4S0 544 aa7.78□□□□□ -1.16
SNRPF-202ENST00000549580 TSEN2Q8NCE0 465 aaKnown RBP7.78□□□□□ -1.16
SNRPF-202ENST00000549580 GSC2O15499 205 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 C21orf2O43822 256 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 CPB1P15086 417 aa7.77□□□□□ -1.17
SNRPF-202ENST00000549580 NFKB1P19838 968 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms