RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
LINC00661-204ENST00000549354 KCNJ4P48050 445 aa13.4□□□□□ -0.26
LINC00661-204ENST00000549354 NRAPQ86VF7 1730 aa13.4□□□□□ -0.26
LINC00661-204ENST00000549354 FIBPO43427 364 aa13.4□□□□□ -0.26
LINC00661-204ENST00000549354 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
LINC00661-204ENST00000549354 IL25Q9H293 177 aa13.4□□□□□ -0.26
LINC00661-204ENST00000549354 NAP1L2Q9ULW6 460 aaPredicted RBP13.4□□□□□ -0.26
LINC00661-204ENST00000549354 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
LINC00661-204ENST00000549354 NBPF7P0C2Y1 421 aaPredicted RBP13.39□□□□□ -0.27
LINC00661-204ENST00000549354 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
LINC00661-204ENST00000549354 TMX3Q96JJ7 454 aa13.39□□□□□ -0.27
LINC00661-204ENST00000549354 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
LINC00661-204ENST00000549354 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
LINC00661-204ENST00000549354 PDE1AP54750 535 aa13.39□□□□□ -0.27
LINC00661-204ENST00000549354 ERC2O15083 957 aa13.38□□□□□ -0.27
LINC00661-204ENST00000549354 REC8O95072 547 aa13.38□□□□□ -0.27
LINC00661-204ENST00000549354 TUBGCP6Q96RT7 1819 aa13.38□□□□□ -0.27
LINC00661-204ENST00000549354 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
LINC00661-204ENST00000549354 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
LINC00661-204ENST00000549354 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
LINC00661-204ENST00000549354 COL15A1P39059 1388 aa13.38□□□□□ -0.27
LINC00661-204ENST00000549354 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
LINC00661-204ENST00000549354 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
LINC00661-204ENST00000549354 SRGAP3O43295 1099 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 PTMSP20962 102 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 PPP1R42Q7Z4L9 355 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 PPP1R9BQ96SB3 815 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 METTL22Q9BUU2 404 aaPredicted RBP13.37□□□□□ -0.27
LINC00661-204ENST00000549354 LRRCC1Q9C099 1032 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 KDM4AO75164 1064 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
LINC00661-204ENST00000549354 IGKV5-2P06315 115 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 STK3Q13188 491 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 XAGE3Q8WTP9 111 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
LINC00661-204ENST00000549354 COPS6Q7L5N1 327 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
LINC00661-204ENST00000549354 AOX1Q06278 1338 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 UQCRHLA0A096LP55 91 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 GRM8O00222 908 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 UQCRHP07919 91 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 MX1P20591 662 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 ITGB4P16144 1822 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
LINC00661-204ENST00000549354 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
LINC00661-204ENST00000549354 NEURL1BA8MQ27 555 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 OFD1O75665 1012 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 ZNF445P59923 1031 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 NECAB1Q8N987 351 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
LINC00661-204ENST00000549354 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 TOM1O60784 492 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 CWF19L2Q2TBE0 894 aaKnown RBP13.34□□□□□ -0.27
LINC00661-204ENST00000549354 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
LINC00661-204ENST00000549354 RIC3Q7Z5B4 369 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
LINC00661-204ENST00000549354 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
LINC00661-204ENST00000549354 PLBD2Q8NHP8 589 aa13.34□□□□□ -0.27
LINC00661-204ENST00000549354 MYL6BP14649 208 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 GCKRQ14397 625 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 HSP90AB4PQ58FF6 505 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 C9orf78Q9NZ63 289 aaPredicted RBP13.33□□□□□ -0.28
LINC00661-204ENST00000549354 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
LINC00661-204ENST00000549354 SLIT2O94813 1529 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 TPM2P07951 284 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
LINC00661-204ENST00000549354 BCL9O00512 1426 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 A0A0G2JS52 829 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 CAMK4Q16566 473 aa13.33□□□□□ -0.28
LINC00661-204ENST00000549354 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
LINC00661-204ENST00000549354 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
LINC00661-204ENST00000549354 SPATA31A1Q5TZJ5 1347 aa13.32□□□□□ -0.28
LINC00661-204ENST00000549354 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
LINC00661-204ENST00000549354 LRSAM1Q6UWE0 723 aa13.32□□□□□ -0.28
LINC00661-204ENST00000549354 PIGBQ92521 554 aa13.32□□□□□ -0.28
LINC00661-204ENST00000549354 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
LINC00661-204ENST00000549354 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
LINC00661-204ENST00000549354 USP42Q9H9J4 1324 aaKnown RBP13.32□□□□□ -0.28
LINC00661-204ENST00000549354 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
LINC00661-204ENST00000549354 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 TEX13AQ9BXU3 409 aaPredicted RBP13.31□□□□□ -0.28
LINC00661-204ENST00000549354 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 CHGBP05060 677 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 RHPN1Q8TCX5 695 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 COL9A3Q14050 684 aaPredicted RBP13.31□□□□□ -0.28
LINC00661-204ENST00000549354 ATG3Q9NT62 314 aa13.31□□□□□ -0.28
LINC00661-204ENST00000549354 NOL7Q9UMY1 257 aaKnown RBP13.31□□□□□ -0.28
LINC00661-204ENST00000549354 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
LINC00661-204ENST00000549354 AFDNP55196 1824 aaKnown RBP13.3□□□□□ -0.28
LINC00661-204ENST00000549354 EXOC5O00471 708 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms