RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 NCAPD2Q15021 1401 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 NUCB2P80303 420 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 JDP2Q8WYK2 163 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
VDR-206ENST00000549336 ARHGAP23Q9P227 1491 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.18
VDR-206ENST00000549336 TPM4P67936 248 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 MYO1BO43795 1136 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
VDR-206ENST00000549336 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
VDR-206ENST00000549336 HSPA1LP34931 641 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 IL6STP40189 918 aaPredicted RBP13.9□□□□□ -0.18
VDR-206ENST00000549336 BLOC1S2Q6QNY1 142 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 CRACR2BQ8N4Y2 399 aaPredicted RBP13.9□□□□□ -0.18
VDR-206ENST00000549336 NAPBQ9H115 298 aa13.9□□□□□ -0.18
VDR-206ENST00000549336 PTPRUQ92729 1446 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
VDR-206ENST00000549336 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
VDR-206ENST00000549336 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
VDR-206ENST00000549336 CRB1P82279 1406 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 H0YIN7 160 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 TRIM37O94972 964 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 ATP2B2Q01814 1243 aa13.89□□□□□ -0.19
VDR-206ENST00000549336 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
VDR-206ENST00000549336 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 CPS1P31327 1500 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
VDR-206ENST00000549336 CLSTN1O94985 981 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 VPS72Q15906 364 aa13.88□□□□□ -0.19
VDR-206ENST00000549336 USP19O94966 1318 aa13.87□□□□□ -0.19
VDR-206ENST00000549336 DDX11L8A8MPP1 907 aa13.87□□□□□ -0.19
VDR-206ENST00000549336 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
VDR-206ENST00000549336 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
VDR-206ENST00000549336 CDKL5O76039 1030 aa13.87□□□□□ -0.19
VDR-206ENST00000549336 G2E3Q7L622 706 aa13.87□□□□□ -0.19
VDR-206ENST00000549336 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
VDR-206ENST00000549336 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 VPS37CA5D8V6 355 aaPredicted RBP13.86□□□□□ -0.19
VDR-206ENST00000549336 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 GCKRQ14397 625 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 AXIN2Q9Y2T1 843 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 GOLIM4O00461 696 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 PDE6BP35913 854 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 CHMP5Q9NZZ3 219 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 HMGB1P09429 215 aaKnown RBP13.86□□□□□ -0.19
VDR-206ENST00000549336 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
VDR-206ENST00000549336 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
VDR-206ENST00000549336 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
VDR-206ENST00000549336 BMP2KLQ5H9B9 411 aa13.85□□□□□ -0.19
VDR-206ENST00000549336 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
VDR-206ENST00000549336 HLA-DOAP06340 250 aa13.85□□□□□ -0.19
VDR-206ENST00000549336 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
VDR-206ENST00000549336 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
VDR-206ENST00000549336 EYA2O00167 538 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
VDR-206ENST00000549336 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 CRNKL1Q9BZJ0 848 aaKnown RBP13.84□□□□□ -0.19
VDR-206ENST00000549336 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
VDR-206ENST00000549336 MROH1Q8NDA8 1641 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
VDR-206ENST00000549336 DCTPP1Q9H773 170 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 MAP3K15Q6ZN16 1313 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 PLCG2P16885 1265 aa13.84□□□□□ -0.19
VDR-206ENST00000549336 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
VDR-206ENST00000549336 KCNQ3O43525 872 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 ITGA6P23229 1130 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 NUCB1Q02818 461 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 MINDY4BA8MYZ0 360 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 ZNF213O14771 459 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 CYP27B1O15528 508 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 HCLS1P14317 486 aaPredicted RBP13.83□□□□□ -0.2
VDR-206ENST00000549336 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.2
VDR-206ENST00000549336 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
VDR-206ENST00000549336 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
VDR-206ENST00000549336 SNRKQ9NRH2 765 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 PIGBQ92521 554 aa13.83□□□□□ -0.2
VDR-206ENST00000549336 BCORL1Q5H9F3 1711 aa13.82□□□□□ -0.2
VDR-206ENST00000549336 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
VDR-206ENST00000549336 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
VDR-206ENST00000549336 JAKMIP1Q96N16 626 aaKnown RBP13.82□□□□□ -0.2
VDR-206ENST00000549336 PALLDQ8WX93 1383 aa13.82□□□□□ -0.2
VDR-206ENST00000549336 CCDC196A0A1B0GTZ2 297 aa13.82□□□□□ -0.2
VDR-206ENST00000549336 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
VDR-206ENST00000549336 PNPLA6Q8IY17 1366 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms