RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
CACNB3-211ENST00000549226 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
CACNB3-211ENST00000549226 TFCP2L1Q9NZI6 479 aa17.67■□□□□ 0.42
CACNB3-211ENST00000549226 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
CACNB3-211ENST00000549226 CASP7P55210 303 aa17.66■□□□□ 0.42
CACNB3-211ENST00000549226 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
CACNB3-211ENST00000549226 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
CACNB3-211ENST00000549226 PHF14O94880 888 aa17.65■□□□□ 0.42
CACNB3-211ENST00000549226 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
CACNB3-211ENST00000549226 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
CACNB3-211ENST00000549226 UBE3BQ7Z3V4 1068 aa17.65■□□□□ 0.42
CACNB3-211ENST00000549226 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
CACNB3-211ENST00000549226 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
CACNB3-211ENST00000549226 STK32BQ9NY57 414 aa17.65■□□□□ 0.42
CACNB3-211ENST00000549226 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
CACNB3-211ENST00000549226 SOCS7O14512 581 aa17.64■□□□□ 0.41
CACNB3-211ENST00000549226 GPTP24298 496 aa17.64■□□□□ 0.41
CACNB3-211ENST00000549226 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
CACNB3-211ENST00000549226 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
CACNB3-211ENST00000549226 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
CACNB3-211ENST00000549226 UBN2Q6ZU65 1347 aa17.64■□□□□ 0.41
CACNB3-211ENST00000549226 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
CACNB3-211ENST00000549226 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
CACNB3-211ENST00000549226 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
CACNB3-211ENST00000549226 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
CACNB3-211ENST00000549226 SETDB2Q96T68 719 aa17.63■□□□□ 0.41
CACNB3-211ENST00000549226 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
CACNB3-211ENST00000549226 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
CACNB3-211ENST00000549226 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
CACNB3-211ENST00000549226 IGHDP01880 384 aa17.62■□□□□ 0.41
CACNB3-211ENST00000549226 SLC15A2Q16348 729 aa17.62■□□□□ 0.41
CACNB3-211ENST00000549226 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
CACNB3-211ENST00000549226 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
CACNB3-211ENST00000549226 SSH3Q8TE77 659 aa17.62■□□□□ 0.41
CACNB3-211ENST00000549226 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
CACNB3-211ENST00000549226 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
CACNB3-211ENST00000549226 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
CACNB3-211ENST00000549226 POLA2Q14181 598 aa17.61■□□□□ 0.41
CACNB3-211ENST00000549226 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
CACNB3-211ENST00000549226 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
CACNB3-211ENST00000549226 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
CACNB3-211ENST00000549226 NUP98P52948 1817 aa17.61■□□□□ 0.41
CACNB3-211ENST00000549226 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
CACNB3-211ENST00000549226 NTSR2O95665 410 aa17.6■□□□□ 0.41
CACNB3-211ENST00000549226 GYS1P13807 737 aa17.6■□□□□ 0.41
CACNB3-211ENST00000549226 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
CACNB3-211ENST00000549226 DEFB132Q7Z7B7 95 aa17.6■□□□□ 0.41
CACNB3-211ENST00000549226 KAZALD1Q96I82 304 aa17.6■□□□□ 0.41
CACNB3-211ENST00000549226 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
CACNB3-211ENST00000549226 IRS4O14654 1257 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-211ENST00000549226 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
CACNB3-211ENST00000549226 NLGN1Q8N2Q7 840 aa17.59■□□□□ 0.41
CACNB3-211ENST00000549226 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
CACNB3-211ENST00000549226 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
CACNB3-211ENST00000549226 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
CACNB3-211ENST00000549226 PDE8AO60658 829 aa17.58■□□□□ 0.4
CACNB3-211ENST00000549226 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.4
CACNB3-211ENST00000549226 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
CACNB3-211ENST00000549226 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
CACNB3-211ENST00000549226 FOXO4P98177 505 aa17.57■□□□□ 0.4
CACNB3-211ENST00000549226 NBPF5PQ86XG9 351 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-211ENST00000549226 COL23A1Q86Y22 540 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-211ENST00000549226 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-211ENST00000549226 ZBTB47Q9UFB7 747 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-211ENST00000549226 NOP58Q9Y2X3 529 aaKnown RBP17.57■□□□□ 0.4
CACNB3-211ENST00000549226 CSF1RP07333 972 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 CTSWP56202 376 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 NFIXQ14938 502 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
CACNB3-211ENST00000549226 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
CACNB3-211ENST00000549226 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
CACNB3-211ENST00000549226 COL24A1Q17RW2 1714 aa17.55■□□□□ 0.4
CACNB3-211ENST00000549226 QSER1Q2KHR3 1735 aa17.55■□□□□ 0.4
CACNB3-211ENST00000549226 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-211ENST00000549226 TM4SF1P30408 202 aa17.55■□□□□ 0.4
CACNB3-211ENST00000549226 EPHA10Q5JZY3 1008 aa17.55■□□□□ 0.4
CACNB3-211ENST00000549226 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
CACNB3-211ENST00000549226 RTL9Q8NET4 1388 aa17.54■□□□□ 0.4
CACNB3-211ENST00000549226 MSH5O43196 834 aa17.54■□□□□ 0.4
CACNB3-211ENST00000549226 NUCB1Q02818 461 aa17.54■□□□□ 0.4
CACNB3-211ENST00000549226 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-211ENST00000549226 BICDL1Q6ZP65 573 aa17.54■□□□□ 0.4
CACNB3-211ENST00000549226 SLC16A10Q8TF71 515 aa17.54■□□□□ 0.4
CACNB3-211ENST00000549226 COPRSQ9NQ92 184 aa17.54■□□□□ 0.4
CACNB3-211ENST00000549226 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
CACNB3-211ENST00000549226 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
CACNB3-211ENST00000549226 CNBD1Q8NA66 436 aa17.53■□□□□ 0.4
CACNB3-211ENST00000549226 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-211ENST00000549226 NPHP1O15259 732 aa17.52■□□□□ 0.4
CACNB3-211ENST00000549226 SURF6O75683 361 aaKnown RBP17.52■□□□□ 0.4
CACNB3-211ENST00000549226 ST5P78524 1137 aa17.52■□□□□ 0.4
CACNB3-211ENST00000549226 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
CACNB3-211ENST00000549226 TTLL11Q8NHH1 800 aa17.52■□□□□ 0.4
CACNB3-211ENST00000549226 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
CACNB3-211ENST00000549226 CHMP3Q9Y3E7 222 aa17.52■□□□□ 0.4
CACNB3-211ENST00000549226 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
CACNB3-211ENST00000549226 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms