RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GGNBP2Q9H3C7 697 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 ZNF804BA4D1E1 1349 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 RAB11FIP3O75154 756 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 HMGB1P09429 215 aaKnown RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 MNX1P50219 401 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 ZCRB1Q8TBF4 217 aaKnown RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 GJD4Q96KN9 370 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 PLIN4Q96Q06 1357 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 CYP19A1P11511 503 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 PRKAR2BP31323 418 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 WDR43Q15061 677 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 PLBD2Q8NHP8 589 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 FBXW7Q969H0 707 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 U2SURPO15042 1029 aaKnown RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 NLRP6P59044 892 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 RBM6P78332 1123 aaKnown RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 ANKRD44Q8N8A2 993 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 ARIH1Q9Y4X5 557 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 ATF7IPQ6VMQ6 1270 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 CENPQQ7L2Z9 268 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 COL11A1P12107 1806 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 CCDC30Q5VVM6 783 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 ZNF790Q6PG37 636 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 SLC16A10Q8TF71 515 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 LARP6Q9BRS8 491 aaKnown RBP6.27□□□□□ -1.41
SCAF11-212ENST00000549162 DDX19BQ9UMR2 479 aa6.27□□□□□ -1.41
SCAF11-212ENST00000549162 RAD50Q92878 1312 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 COL4A6Q14031 1691 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 GPR37O15354 613 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 CLEC17AQ6ZS10 378 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 DCTPP1Q9H773 170 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 COPRSQ9NQ92 184 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 RGS17Q9UGC6 210 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-212ENST00000549162 DOCK5Q9H7D0 1870 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 TM4SF1P30408 202 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 PARP10Q53GL7 1025 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 DBF4Q9UBU7 674 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-212ENST00000549162 TTC41PQ6P2S7 1318 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 MYO3BQ8WXR4 1341 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 MAPK8IP3Q9UPT6 1336 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 UNCXA6NJT0 531 aa6.26□□□□□ -1.41
SCAF11-212ENST00000549162 SNRPA1P09661 255 aaKnown RBP6.26□□□□□ -1.41
SCAF11-212ENST00000549162 CCDC191Q8NCU4 936 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 MYT1LQ9UL68 1186 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 MYH1P12882 1939 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 MYH2Q9UKX2 1941 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 PCCAP05165 728 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-212ENST00000549162 VGLL2Q8N8G2 317 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 METTL22Q9BUU2 404 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-212ENST00000549162 PPP4R2Q9NY27 417 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 ZRANB1Q9UGI0 708 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 RCAN3Q9UKA8 241 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 FAM43BQ6ZT52 329 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-212ENST00000549162 PMFBP1Q8TBY8 1022 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 GOPCQ9HD26 462 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 SUGT1Q9Y2Z0 365 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 MAP3K15Q6ZN16 1313 aa6.25□□□□□ -1.41
SCAF11-212ENST00000549162 COL4A4P53420 1690 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-212ENST00000549162 KSR2Q6VAB6 950 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 CERS3Q8IU89 383 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 FMNL2Q96PY5 1086 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 CENPBP07199 599 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-212ENST00000549162 FGRP09769 529 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 RCAN1P53805 252 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 USP35Q9P2H5 1018 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 NUCB1Q02818 461 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 LINS1Q8NG48 757 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 SRCIN1Q9C0H9 1055 aa6.24□□□□□ -1.41
SCAF11-212ENST00000549162 FAM196AQ6ZSG2 479 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 METTL16Q86W50 562 aaKnown RBP6.23□□□□□ -1.41
SCAF11-212ENST00000549162 CCDC102AQ96A19 550 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 PLSCR2Q9NRY7 297 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 MARCH10Q8NA82 808 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-212ENST00000549162 MED23Q9ULK4 1368 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 RPS6KA4O75676 772 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 FGFR2P21802 821 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 ZKSCAN2Q63HK3 967 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 CAMKK2Q96RR4 588 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 STK26Q9P289 416 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 SH3TC1Q8TE82 1336 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 KIAA1671Q9BY89 1806 aa6.23□□□□□ -1.41
SCAF11-212ENST00000549162 CAMTA2O94983 1202 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 RIPK4P57078 832 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 MFSD10Q14728 455 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 FBXO22Q8NEZ5 403 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 LCTP09848 1927 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 HSPA2P54652 639 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 MCCD1P59942 119 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-212ENST00000549162 ATP8B2P98198 1209 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 AMHR2Q16671 573 aa6.22□□□□□ -1.41
SCAF11-212ENST00000549162 EVCP57679 992 aa6.21□□□□□ -1.41
SCAF11-212ENST00000549162 CAMK2BQ13554 666 aa6.21□□□□□ -1.41
SCAF11-212ENST00000549162 SULT6B1Q6IMI4 303 aa6.21□□□□□ -1.41
SCAF11-212ENST00000549162 DDIT3P35638 169 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms