RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 LTBP3Q9NS15 1303 aa19.04■□□□□ 0.64
LINC00661-203ENST00000549131 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
LINC00661-203ENST00000549131 CRY2Q49AN0 593 aa19.04■□□□□ 0.64
LINC00661-203ENST00000549131 CCDC93Q567U6 631 aa19.04■□□□□ 0.64
LINC00661-203ENST00000549131 UTP14AQ9BVJ6 771 aaKnown RBP19.03■□□□□ 0.64
LINC00661-203ENST00000549131 HYPKQ9NX55 129 aa19.03■□□□□ 0.64
LINC00661-203ENST00000549131 ALDH1B1P30837 517 aa19.02■□□□□ 0.64
LINC00661-203ENST00000549131 TSR2Q969E8 191 aaKnown RBP19.02■□□□□ 0.64
LINC00661-203ENST00000549131 TAF1P21675 1872 aa19.02■□□□□ 0.64
LINC00661-203ENST00000549131 RNF123Q5XPI4 1314 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 WDR90Q96KV7 1748 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 TCIRG1Q13488 830 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 CCDC27Q2M243 656 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 NLRP10Q86W26 655 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 WWC1Q8IX03 1113 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 C16orf71Q8IYS4 520 aaPredicted RBP19.01■□□□□ 0.63
LINC00661-203ENST00000549131 PLBD2Q8NHP8 589 aa19.01■□□□□ 0.63
LINC00661-203ENST00000549131 C3orf67Q6ZVT6 689 aa19■□□□□ 0.63
LINC00661-203ENST00000549131 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
LINC00661-203ENST00000549131 C7orf43Q8WVR3 580 aa19■□□□□ 0.63
LINC00661-203ENST00000549131 CACNA1FO60840 1977 aa18.99■□□□□ 0.63
LINC00661-203ENST00000549131 ANKRD13DQ6ZTN6 518 aa18.99■□□□□ 0.63
LINC00661-203ENST00000549131 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
LINC00661-203ENST00000549131 RBM17Q96I25 401 aaKnown RBP18.99■□□□□ 0.63
LINC00661-203ENST00000549131 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
LINC00661-203ENST00000549131 GLTPD2A6NH11 291 aa18.98■□□□□ 0.63
LINC00661-203ENST00000549131 TOMM70O94826 608 aa18.98■□□□□ 0.63
LINC00661-203ENST00000549131 GOLGA2Q08379 1002 aa18.98■□□□□ 0.63
LINC00661-203ENST00000549131 NLRP3Q96P20 1036 aa18.98■□□□□ 0.63
LINC00661-203ENST00000549131 RRAGCQ9HB90 399 aa18.98■□□□□ 0.63
LINC00661-203ENST00000549131 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
LINC00661-203ENST00000549131 SH3TC1Q8TE82 1336 aa18.98■□□□□ 0.63
LINC00661-203ENST00000549131 HOXA10P31260 410 aaPredicted RBP18.97■□□□□ 0.63
LINC00661-203ENST00000549131 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC00661-203ENST00000549131 RTKN2Q8IZC4 609 aa18.97■□□□□ 0.63
LINC00661-203ENST00000549131 FAM9BQ8IZU0 186 aa18.97■□□□□ 0.63
LINC00661-203ENST00000549131 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
LINC00661-203ENST00000549131 SNED1Q8TER0 1413 aa18.97■□□□□ 0.63
LINC00661-203ENST00000549131 CEP350Q5VT06 3117 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 ATP5J2-PTCD1G3V325 749 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 PPEF1O14829 653 aaPredicted RBP18.96■□□□□ 0.63
LINC00661-203ENST00000549131 HCLS1P14317 486 aaPredicted RBP18.96■□□□□ 0.63
LINC00661-203ENST00000549131 CCDC30Q5VVM6 783 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 TSPYL6Q8N831 410 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
LINC00661-203ENST00000549131 LRRC37AA6NMS7 1700 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 IL16Q14005 1332 aa18.96■□□□□ 0.63
LINC00661-203ENST00000549131 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
LINC00661-203ENST00000549131 HSPA6P17066 643 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 SLC10A5Q5PT55 438 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 DPY19L2Q6NUT2 758 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 SYNE4Q8N205 404 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 CHMP4AQ9BY43 222 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 MYH3P11055 1940 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 SCN4AP35499 1836 aa18.95■□□□□ 0.62
LINC00661-203ENST00000549131 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
LINC00661-203ENST00000549131 ISCA1Q9BUE6 129 aa18.94■□□□□ 0.62
LINC00661-203ENST00000549131 ABCC4O15439 1325 aa18.94■□□□□ 0.62
LINC00661-203ENST00000549131 FANCIQ9NVI1 1328 aa18.94■□□□□ 0.62
LINC00661-203ENST00000549131 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
LINC00661-203ENST00000549131 CC2D2BQ6DHV5 1058 aa18.93■□□□□ 0.62
LINC00661-203ENST00000549131 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
LINC00661-203ENST00000549131 RBM46Q8TBY0 533 aaKnown RBP18.93■□□□□ 0.62
LINC00661-203ENST00000549131 STK31Q9BXU1 1019 aa18.93■□□□□ 0.62
LINC00661-203ENST00000549131 VEGFAP15692 232 aaPredicted RBP18.92■□□□□ 0.62
LINC00661-203ENST00000549131 IARSP41252 1262 aaKnown RBP18.92■□□□□ 0.62
LINC00661-203ENST00000549131 RTL5Q5HYW3 569 aaPredicted RBP18.92■□□□□ 0.62
LINC00661-203ENST00000549131 COL4A5P29400 1685 aa18.92■□□□□ 0.62
LINC00661-203ENST00000549131 SPEF2Q9C093 1822 aa18.91■□□□□ 0.62
LINC00661-203ENST00000549131 DDX58O95786 925 aaKnown RBP18.91■□□□□ 0.62
LINC00661-203ENST00000549131 FAM89AQ96GI7 184 aa18.91■□□□□ 0.62
LINC00661-203ENST00000549131 PSMD1Q99460 953 aa18.91■□□□□ 0.62
LINC00661-203ENST00000549131 MYD88Q99836 296 aa18.91■□□□□ 0.62
LINC00661-203ENST00000549131 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
LINC00661-203ENST00000549131 DDX46Q7L014 1031 aaKnown RBP18.9■□□□□ 0.62
LINC00661-203ENST00000549131 ZNF541Q9H0D2 1346 aa18.9■□□□□ 0.62
LINC00661-203ENST00000549131 COL4A1P02462 1669 aa18.89■□□□□ 0.61
LINC00661-203ENST00000549131 DDNO94850 711 aaPredicted RBP18.89■□□□□ 0.61
LINC00661-203ENST00000549131 GRIPAP1Q4V328 841 aa18.89■□□□□ 0.61
LINC00661-203ENST00000549131 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
LINC00661-203ENST00000549131 SMC1BQ8NDV3 1235 aa18.88■□□□□ 0.61
LINC00661-203ENST00000549131 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
LINC00661-203ENST00000549131 IRS4O14654 1257 aaPredicted RBP18.87■□□□□ 0.61
LINC00661-203ENST00000549131 FSTL1Q12841 308 aa18.87■□□□□ 0.61
LINC00661-203ENST00000549131 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
LINC00661-203ENST00000549131 GRAPQ13588 217 aa18.87■□□□□ 0.61
LINC00661-203ENST00000549131 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
LINC00661-203ENST00000549131 JDP2Q8WYK2 163 aa18.87■□□□□ 0.61
LINC00661-203ENST00000549131 DUOX1Q9NRD9 1551 aa18.87■□□□□ 0.61
LINC00661-203ENST00000549131 MAP3K2Q9Y2U5 619 aa18.87■□□□□ 0.61
LINC00661-203ENST00000549131 POTECB2RU33 542 aa18.86■□□□□ 0.61
LINC00661-203ENST00000549131 LARGE2Q8N3Y3 721 aa18.86■□□□□ 0.61
LINC00661-203ENST00000549131 METTL22Q9BUU2 404 aaPredicted RBP18.86■□□□□ 0.61
LINC00661-203ENST00000549131 CWC25Q9NXE8 425 aaPredicted RBP18.86■□□□□ 0.61
LINC00661-203ENST00000549131 LTBP1Q14766 1721 aa18.86■□□□□ 0.61
LINC00661-203ENST00000549131 PI4KAP2A4QPH2 592 aa18.85■□□□□ 0.61
LINC00661-203ENST00000549131 BBOX1O75936 387 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms