RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 NLRP10Q86W26 655 aa25.66■■□□□ 1.7
RBFOX1-211ENST00000548749 ARFGEF2Q9Y6D5 1785 aa25.66■■□□□ 1.7
RBFOX1-211ENST00000548749 C9orf131Q5VYM1 1079 aa25.65■■□□□ 1.7
RBFOX1-211ENST00000548749 RIC3Q7Z5B4 369 aa25.65■■□□□ 1.7
RBFOX1-211ENST00000548749 ZNF526Q8TF50 670 aaPredicted RBP25.65■■□□□ 1.7
RBFOX1-211ENST00000548749 ZNF428Q96B54 188 aa25.65■■□□□ 1.7
RBFOX1-211ENST00000548749 STK31Q9BXU1 1019 aa25.65■■□□□ 1.7
RBFOX1-211ENST00000548749 SPINK5Q9NQ38 1064 aaPredicted RBP25.65■■□□□ 1.7
RBFOX1-211ENST00000548749 RIC1Q4ADV7 1423 aa25.63■■□□□ 1.69
RBFOX1-211ENST00000548749 ATP5J2-PTCD1G3V325 749 aa25.63■■□□□ 1.69
RBFOX1-211ENST00000548749 MYH16Q9H6N6 1097 aa25.63■■□□□ 1.69
RBFOX1-211ENST00000548749 RNF181Q9P0P0 153 aa25.63■■□□□ 1.69
RBFOX1-211ENST00000548749 TRMT112Q9UI30 125 aaKnown RBP25.63■■□□□ 1.69
RBFOX1-211ENST00000548749 SBF1O95248 1867 aa25.63■■□□□ 1.69
RBFOX1-211ENST00000548749 EXOSC9Q06265 439 aaKnown RBP25.62■■□□□ 1.69
RBFOX1-211ENST00000548749 DIEXFQ68CQ4 756 aaKnown RBP25.62■■□□□ 1.69
RBFOX1-211ENST00000548749 RPGRQ92834 1020 aaKnown RBP25.62■■□□□ 1.69
RBFOX1-211ENST00000548749 CRY2Q49AN0 593 aa25.61■■□□□ 1.69
RBFOX1-211ENST00000548749 RNF123Q5XPI4 1314 aa25.61■■□□□ 1.69
RBFOX1-211ENST00000548749 NFKBIEO00221 500 aa25.6■■□□□ 1.69
RBFOX1-211ENST00000548749 DDX58O95786 925 aaKnown RBP25.6■■□□□ 1.69
RBFOX1-211ENST00000548749 ALDH1B1P30837 517 aa25.6■■□□□ 1.69
RBFOX1-211ENST00000548749 C3orf67Q6ZVT6 689 aa25.6■■□□□ 1.69
RBFOX1-211ENST00000548749 ISCA1Q9BUE6 129 aa25.6■■□□□ 1.69
RBFOX1-211ENST00000548749 SYNE4Q8N205 404 aa25.59■■□□□ 1.69
RBFOX1-211ENST00000548749 NLRP3Q96P20 1036 aa25.59■■□□□ 1.69
RBFOX1-211ENST00000548749 GPBP1L1Q9HC44 474 aaPredicted RBP25.59■■□□□ 1.69
RBFOX1-211ENST00000548749 SH3TC1Q8TE82 1336 aa25.59■■□□□ 1.69
RBFOX1-211ENST00000548749 FER1L6Q2WGJ9 1857 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 CCDC88AQ3V6T2 1871 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 HCLS1P14317 486 aaPredicted RBP25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 LMNB1P20700 586 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 SLC10A5Q5PT55 438 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 SOGA3Q5TF21 947 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 MYD88Q99836 296 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 ZNF521Q96K83 1311 aa25.58■■□□□ 1.69
RBFOX1-211ENST00000548749 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
RBFOX1-211ENST00000548749 RBM17Q96I25 401 aaKnown RBP25.57■■□□□ 1.68
RBFOX1-211ENST00000548749 VAMP4O75379 141 aa25.56■■□□□ 1.68
RBFOX1-211ENST00000548749 PRELPP51888 382 aa25.56■■□□□ 1.68
RBFOX1-211ENST00000548749 LAMB2P55268 1798 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 HOXA10P31260 410 aaPredicted RBP25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 CCDC93Q567U6 631 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 OLFM4Q6UX06 510 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 G2E3Q7L622 706 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 C7orf43Q8WVR3 580 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 FAM89AQ96GI7 184 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 TAOK3Q9H2K8 898 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 MAP3K2Q9Y2U5 619 aa25.55■■□□□ 1.68
RBFOX1-211ENST00000548749 TRIM28Q13263 835 aaKnown RBP25.54■■□□□ 1.68
RBFOX1-211ENST00000548749 RTL5Q5HYW3 569 aaPredicted RBP25.54■■□□□ 1.68
RBFOX1-211ENST00000548749 MIER1Q8N108 512 aa25.54■■□□□ 1.68
RBFOX1-211ENST00000548749 PI4KAP2A4QPH2 592 aa25.53■■□□□ 1.68
RBFOX1-211ENST00000548749 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
RBFOX1-211ENST00000548749 PI4KAP1Q8N8J0 262 aa25.53■■□□□ 1.68
RBFOX1-211ENST00000548749 CRAMP1Q96RY5 1269 aa25.53■■□□□ 1.68
RBFOX1-211ENST00000548749 METTL22Q9BUU2 404 aaPredicted RBP25.53■■□□□ 1.68
RBFOX1-211ENST00000548749 CACNA1FO60840 1977 aa25.52■■□□□ 1.68
RBFOX1-211ENST00000548749 DDX60Q8IY21 1712 aaKnown RBP25.51■■□□□ 1.68
RBFOX1-211ENST00000548749 LTBP3Q9NS15 1303 aa25.51■■□□□ 1.67
RBFOX1-211ENST00000548749 TIAM2Q8IVF5 1701 aa25.51■■□□□ 1.67
RBFOX1-211ENST00000548749 FLIIQ13045 1269 aa25.5■■□□□ 1.67
RBFOX1-211ENST00000548749 PPEF1O14829 653 aaPredicted RBP25.49■■□□□ 1.67
RBFOX1-211ENST00000548749 RTKN2Q8IZC4 609 aa25.49■■□□□ 1.67
RBFOX1-211ENST00000548749 CCDC191Q8NCU4 936 aa25.49■■□□□ 1.67
RBFOX1-211ENST00000548749 CWC25Q9NXE8 425 aaPredicted RBP25.49■■□□□ 1.67
RBFOX1-211ENST00000548749 ABCC4O15439 1325 aa25.48■■□□□ 1.67
RBFOX1-211ENST00000548749 E9PSI1 815 aa25.48■■□□□ 1.67
RBFOX1-211ENST00000548749 IRS4O14654 1257 aaPredicted RBP25.48■■□□□ 1.67
RBFOX1-211ENST00000548749 NEXNQ0ZGT2 675 aa25.48■■□□□ 1.67
RBFOX1-211ENST00000548749 FKBP5Q13451 457 aaPredicted RBP25.48■■□□□ 1.67
RBFOX1-211ENST00000548749 ZBTB38Q8NAP3 1195 aaPredicted RBP25.48■■□□□ 1.67
RBFOX1-211ENST00000548749 DICER1Q9UPY3 1922 aaKnown RBP25.47■■□□□ 1.67
RBFOX1-211ENST00000548749 ZC3H4Q9UPT8 1303 aaKnown RBP25.47■■□□□ 1.67
RBFOX1-211ENST00000548749 FKBP4Q02790 459 aaKnown RBP eCLIP25.47■■□□□ 1.67
RBFOX1-211ENST00000548749 DDX46Q7L014 1031 aaKnown RBP25.47■■□□□ 1.67
RBFOX1-211ENST00000548749 SLC51AQ86UW1 340 aa25.46■■□□□ 1.67
RBFOX1-211ENST00000548749 JARID2Q92833 1246 aaPredicted RBP25.46■■□□□ 1.67
RBFOX1-211ENST00000548749 KDM2BQ8NHM5 1336 aa25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 PCCAP05165 728 aaPredicted RBP25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 IGKV5-2P06315 115 aa25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 SLFN5Q08AF3 891 aa25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 CC2D2BQ6DHV5 1058 aa25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 NMRK2Q9NPI5 230 aa25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 ZNF277Q9NRM2 450 aaPredicted RBP25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 TAF1P21675 1872 aa25.45■■□□□ 1.66
RBFOX1-211ENST00000548749 CWF19L2Q2TBE0 894 aaKnown RBP25.44■■□□□ 1.66
RBFOX1-211ENST00000548749 CDCA7LQ96GN5 454 aa25.44■■□□□ 1.66
RBFOX1-211ENST00000548749 TMX4Q9H1E5 349 aaPredicted RBP25.44■■□□□ 1.66
RBFOX1-211ENST00000548749 C1QTNF8P60827 252 aa25.43■■□□□ 1.66
RBFOX1-211ENST00000548749 DNAAF4Q8WXU2 420 aa25.43■■□□□ 1.66
RBFOX1-211ENST00000548749 BBOX1O75936 387 aa25.42■■□□□ 1.66
RBFOX1-211ENST00000548749 HSP90B1P14625 803 aaKnown RBP25.42■■□□□ 1.66
RBFOX1-211ENST00000548749 GRAPQ13588 217 aa25.42■■□□□ 1.66
RBFOX1-211ENST00000548749 SF3B3Q15393 1217 aaKnown RBP25.42■■□□□ 1.66
RBFOX1-211ENST00000548749 GRAPLQ8TC17 118 aaPredicted RBP25.42■■□□□ 1.66
RBFOX1-211ENST00000548749 ATP6V0A2Q9Y487 856 aa25.42■■□□□ 1.66
RBFOX1-211ENST00000548749 SNED1Q8TER0 1413 aa25.41■■□□□ 1.66
RBFOX1-211ENST00000548749 NEURL1BA8MQ27 555 aa25.41■■□□□ 1.66
RBFOX1-211ENST00000548749 KIF3CO14782 793 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms