RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 COPRSQ9NQ92 184 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 ANKRD36CQ5JPF3 1778 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 C1orf141Q5JVX7 400 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 CWC27Q6UX04 472 aaKnown RBP8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 ZSCAN31Q96LW9 406 aaPredicted RBP8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 HDAC5Q9UQL6 1122 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 TNS3Q68CZ2 1445 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 SLC27A2O14975 620 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 STX6O43752 255 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 CPA1P15085 419 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 GCKRQ14397 625 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 CREB3L3Q68CJ9 461 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 TSPY26PQ9H489 355 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 SH2B1Q9NRF2 756 aaPredicted RBP8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 ECM29Q5VYK3 1845 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 ME3Q16798 604 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 RUFY2Q8WXA3 655 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 FAM227BQ96M60 508 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 RBM8AQ9Y5S9 174 aaKnown RBP8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 NHSL1Q5SYE7 1610 aa8.59□□□□□ -1.03
PDZRN4-204ENST00000548316 ZNF609O15014 1411 aa8.59□□□□□ -1.04
PDZRN4-204ENST00000548316 C4AP0C0L4 1744 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 C4BP0C0L5 1744 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 A0A0D9SFI3 127 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 ARAP2Q8WZ64 1704 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 WNK3Q9BYP7 1800 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 HIP1O00291 1037 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 TOB2Q14106 344 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 CCDC183Q5T5S1 534 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 LARP1Q6PKG0 1096 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 C14orf37Q86TY3 774 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 AACSQ86V21 672 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 TRIM44Q96DX7 344 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 PDRG1Q9NUG6 133 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 TPCN1Q9ULQ1 816 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 TPM2P07951 284 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 UBE2HP62256 183 aa8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 PTPN12Q05209 780 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 NOL8Q76FK4 1167 aaKnown RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 C9orf78Q9NZ63 289 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.58□□□□□ -1.04
PDZRN4-204ENST00000548316 AKAP11Q9UKA4 1901 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 ITGB4P16144 1822 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 CYP27B1O15528 508 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 ATP5JP18859 108 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 DIAPH3Q9NSV4 1193 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 TAF5LO75529 589 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 DDX58O95786 925 aaKnown RBP8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 TICAM2Q86XR7 235 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 GPATCH3Q96I76 525 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 ELP1O95163 1332 aa8.57□□□□□ -1.04
PDZRN4-204ENST00000548316 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 RPS6KB1P23443 525 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 GJB2P29033 226 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 ZNF589Q86UQ0 364 aaPredicted RBP8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 CYP46A1Q9Y6A2 500 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 SLC39A6Q13433 755 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 RBM43Q6ZSC3 357 aaKnown RBP8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 FAM184AQ8NB25 1140 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 SYAP1Q96A49 352 aaPredicted RBP8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 C19orf44Q9H6X5 657 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 DBNLQ9UJU6 430 aaKnown RBP8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 MYH3P11055 1940 aa8.56□□□□□ -1.04
PDZRN4-204ENST00000548316 LRP5O75197 1615 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 AP5Z1O43299 807 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 FOXO4P98177 505 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 KIAA1211Q6ZU35 1233 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 CCDC83Q8IWF9 413 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 CCDC8Q9H0W5 538 aaPredicted RBP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 SMC3Q9UQE7 1217 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 H7C1W4 665 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 LETM1O95202 739 aaPredicted RBP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 TNNI3KQ59H18 835 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 NAP1L5Q96NT1 182 aaPredicted RBP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 FPGT-TNNI3KV9GXZ4 949 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms