RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 PPP1R12CQ9BZL4 782 aa7.85□□□□□ -1.15
RPAP3-206ENST00000548296 M0R082 166 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
RPAP3-206ENST00000548296 ADH7P40394 386 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 TYRO3Q06418 890 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 CFAP70Q5T0N1 1121 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 ZNF280CQ8ND82 737 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 ZNF417Q8TAU3 575 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 HSH2DQ96JZ2 352 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 ZNF587Q96SQ5 575 aaPredicted RBP7.84□□□□□ -1.15
RPAP3-206ENST00000548296 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
RPAP3-206ENST00000548296 APBA3O96018 575 aa7.83□□□□□ -1.16
RPAP3-206ENST00000548296 GATA4P43694 442 aa7.83□□□□□ -1.16
RPAP3-206ENST00000548296 TRIM28Q13263 835 aaKnown RBP7.83□□□□□ -1.16
RPAP3-206ENST00000548296 BTLAQ7Z6A9 289 aa7.83□□□□□ -1.16
RPAP3-206ENST00000548296 MICALL1Q8N3F8 863 aa7.83□□□□□ -1.16
RPAP3-206ENST00000548296 CHMP7Q8WUX9 453 aaPredicted RBP7.83□□□□□ -1.16
RPAP3-206ENST00000548296 PBXIP1Q96AQ6 731 aa7.83□□□□□ -1.16
RPAP3-206ENST00000548296 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
RPAP3-206ENST00000548296 RTN1Q16799 776 aa7.82□□□□□ -1.16
RPAP3-206ENST00000548296 IER5Q5VY09 327 aa7.82□□□□□ -1.16
RPAP3-206ENST00000548296 NACC1Q96RE7 527 aa7.82□□□□□ -1.16
RPAP3-206ENST00000548296 TRAIPQ9BWF2 469 aa7.82□□□□□ -1.16
RPAP3-206ENST00000548296 STARD13Q9Y3M8 1113 aa7.82□□□□□ -1.16
RPAP3-206ENST00000548296 PTK7Q13308 1070 aa7.81□□□□□ -1.16
RPAP3-206ENST00000548296 BHMTQ93088 406 aa7.81□□□□□ -1.16
RPAP3-206ENST00000548296 NGLY1Q96IV0 654 aa7.81□□□□□ -1.16
RPAP3-206ENST00000548296 VRTNQ9H8Y1 702 aa7.81□□□□□ -1.16
RPAP3-206ENST00000548296 FAM196BA6NMK8 535 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 LILRB5O75023 590 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 EPB42P16452 691 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 IGFBP4P22692 258 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 DPYDQ12882 1025 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
RPAP3-206ENST00000548296 RAB44Q7Z6P3 723 aaPredicted RBP7.8□□□□□ -1.16
RPAP3-206ENST00000548296 RETREG2Q8NC44 543 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 PNMA5Q96PV4 448 aa7.8□□□□□ -1.16
RPAP3-206ENST00000548296 ALBP02768 609 aa7.79□□□□□ -1.16
RPAP3-206ENST00000548296 PCSK7Q16549 785 aa7.79□□□□□ -1.16
RPAP3-206ENST00000548296 ANKMY2Q8IV38 441 aa7.79□□□□□ -1.16
RPAP3-206ENST00000548296 UBE2OQ9C0C9 1292 aaKnown RBP7.79□□□□□ -1.16
RPAP3-206ENST00000548296 ACIN1Q9UKV3 1341 aaKnown RBP7.78□□□□□ -1.16
RPAP3-206ENST00000548296 TGFBR3LH3BV60 316 aa7.78□□□□□ -1.16
RPAP3-206ENST00000548296 LMOD1P29536 600 aaPredicted RBP7.78□□□□□ -1.16
RPAP3-206ENST00000548296 PDE4CQ08493 712 aa7.78□□□□□ -1.16
RPAP3-206ENST00000548296 COL9A3Q14050 684 aaPredicted RBP7.78□□□□□ -1.16
RPAP3-206ENST00000548296 DOC2BQ14184 412 aa7.78□□□□□ -1.16
RPAP3-206ENST00000548296 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
RPAP3-206ENST00000548296 TRAPPC3LQ5T215 181 aa7.78□□□□□ -1.16
RPAP3-206ENST00000548296 C20orf204Q6ZNR8 217 aa7.78□□□□□ -1.16
RPAP3-206ENST00000548296 C11orf16Q9NQ32 467 aa7.78□□□□□ -1.16
RPAP3-206ENST00000548296 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.16
RPAP3-206ENST00000548296 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L10C9JJH3 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L21D6R901 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 NID1P14543 1247 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 CCINQ13939 588 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 GSX2Q9BZM3 304 aa7.77□□□□□ -1.17
RPAP3-206ENST00000548296 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
RPAP3-206ENST00000548296 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.76□□□□□ -1.17
RPAP3-206ENST00000548296 C9orf172C9J069 976 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 TBC1D8BQ0IIM8 1120 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 TRIM26Q12899 539 aaPredicted RBP7.76□□□□□ -1.17
RPAP3-206ENST00000548296 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 VTI1AQ96AJ9 217 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 SEMA6BQ9H3T3 888 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 SLC6A14Q9UN76 642 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 USTQ9Y2C2 406 aa7.76□□□□□ -1.17
RPAP3-206ENST00000548296 FOXO3O43524 673 aa7.75□□□□□ -1.17
RPAP3-206ENST00000548296 RFX1P22670 979 aa7.75□□□□□ -1.17
RPAP3-206ENST00000548296 DMGDHQ9UI17 866 aaKnown RBP7.75□□□□□ -1.17
RPAP3-206ENST00000548296 RAC1P63000 192 aa7.74□□□□□ -1.17
RPAP3-206ENST00000548296 XP32Q5T750 250 aa7.74□□□□□ -1.17
RPAP3-206ENST00000548296 JPH1Q9HDC5 661 aaPredicted RBP7.74□□□□□ -1.17
RPAP3-206ENST00000548296 DNAJB12Q9NXW2 375 aaKnown RBP7.74□□□□□ -1.17
RPAP3-206ENST00000548296 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 RGS9O75916 674 aaPredicted RBP7.73□□□□□ -1.17
RPAP3-206ENST00000548296 ATG7O95352 703 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 MAP3K6O95382 1288 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 ELNP15502 786 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 ARID4AP29374 1257 aaPredicted RBP7.73□□□□□ -1.17
RPAP3-206ENST00000548296 WEE1P30291 646 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 INPP5BP32019 993 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 BCS1LQ9Y276 419 aa7.73□□□□□ -1.17
RPAP3-206ENST00000548296 NFKB1P19838 968 aa7.72□□□□□ -1.17
RPAP3-206ENST00000548296 NRG1Q02297 640 aaPredicted RBP7.72□□□□□ -1.17
RPAP3-206ENST00000548296 C11orf91Q3C1V1 193 aa7.72□□□□□ -1.17
RPAP3-206ENST00000548296 Q8N3U1 123 aa7.72□□□□□ -1.17
RPAP3-206ENST00000548296 A0A0A0MRY4 1105 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms