RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 FLIIQ13045 1269 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 C8orf58Q8NAV2 365 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
PTPRB-206ENST00000548122 MAP3K15Q6ZN16 1313 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 KIF16BQ96L93 1317 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 UBE3BQ7Z3V4 1068 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 PDGFDQ9GZP0 370 aaPredicted RBP6.83□□□□□ -1.32
PTPRB-206ENST00000548122 PPP4R2Q9NY27 417 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 NSFL1CQ9UNZ2 370 aaKnown RBP6.83□□□□□ -1.32
PTPRB-206ENST00000548122 GJA3Q9Y6H8 435 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 IRS4O14654 1257 aaPredicted RBP6.83□□□□□ -1.32
PTPRB-206ENST00000548122 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
PTPRB-206ENST00000548122 LARGE2Q8N3Y3 721 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 PLBD2Q8NHP8 589 aa6.83□□□□□ -1.32
PTPRB-206ENST00000548122 USP42Q9H9J4 1324 aaKnown RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 CHRNA5P30532 468 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 ZKSCAN2Q63HK3 967 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 CLEC4GQ6UXB4 293 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 NOL8Q76FK4 1167 aaKnown RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 PLEKHF1Q96S99 279 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 GYS1P13807 737 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 EIF6P56537 245 aaKnown RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 TBC1D9BQ66K14 1250 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 ANKRD18AQ8IVF6 992 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 FAM89AQ96GI7 184 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 CDCA7LQ96GN5 454 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 RNF181Q9P0P0 153 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 TRIM35Q9UPQ4 493 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 IL16Q14005 1332 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 F6X3S4 739 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 CHRM1P11229 460 aaPredicted RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 DPEP1P16444 411 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 GPBP1L1Q9HC44 474 aaPredicted RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 CARMIL3Q8ND23 1372 aa6.82□□□□□ -1.32
PTPRB-206ENST00000548122 SOS1Q07889 1333 aaPredicted RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 KDM6AO15550 1401 aaPredicted RBP6.82□□□□□ -1.32
PTPRB-206ENST00000548122 IFIT5Q13325 482 aaKnown RBP6.81□□□□□ -1.32
PTPRB-206ENST00000548122 KSR2Q6VAB6 950 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 AKT1S1Q96B36 256 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 C21orf2O43822 256 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 EIF5P55010 431 aaKnown RBP6.81□□□□□ -1.32
PTPRB-206ENST00000548122 TCIRG1Q13488 830 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 GIGYF2Q6Y7W6 1299 aaKnown RBP6.81□□□□□ -1.32
PTPRB-206ENST00000548122 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
PTPRB-206ENST00000548122 ANKRD18BA2A2Z9 1011 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 DPP8Q6V1X1 898 aaPredicted RBP6.81□□□□□ -1.32
PTPRB-206ENST00000548122 MASTLQ96GX5 879 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 PHAXQ9H814 394 aaKnown RBP6.81□□□□□ -1.32
PTPRB-206ENST00000548122 ERVV-1B6SEH8 477 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 NIM1KQ8IY84 436 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 EYA3Q99504 573 aa6.81□□□□□ -1.32
PTPRB-206ENST00000548122 NPR1P16066 1061 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 RBM5P52756 815 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRB-206ENST00000548122 TGFB2P61812 414 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 CCDC93Q567U6 631 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
PTPRB-206ENST00000548122 TSPYL6Q8N831 410 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 SUPT20HQ8NEM7 779 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 BRIP1Q9BX63 1249 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 RIMBP2O15034 1052 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 PPIP5K2O43314 1243 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 HMMRO75330 724 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 G3BP1Q13283 466 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRB-206ENST00000548122 ERFEQ4G0M1 354 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
PTPRB-206ENST00000548122 TAOK3Q9H2K8 898 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 RCAN3Q9UKA8 241 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 GNAI3P08754 354 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 CCT4P50991 539 aaKnown RBP6.8□□□□□ -1.32
PTPRB-206ENST00000548122 GRM1Q13255 1194 aa6.8□□□□□ -1.32
PTPRB-206ENST00000548122 PLEKHG2Q9H7P9 1386 aa6.79□□□□□ -1.32
PTPRB-206ENST00000548122 HLFQ16534 295 aa6.79□□□□□ -1.32
PTPRB-206ENST00000548122 PROSER3Q2NL68 480 aa6.79□□□□□ -1.32
PTPRB-206ENST00000548122 MPNDQ8N594 471 aa6.79□□□□□ -1.32
PTPRB-206ENST00000548122 CCDC191Q8NCU4 936 aa6.79□□□□□ -1.32
PTPRB-206ENST00000548122 NEUROD6Q96NK8 337 aa6.79□□□□□ -1.32
PTPRB-206ENST00000548122 MARF1Q9Y4F3 1742 aaKnown RBP6.79□□□□□ -1.32
PTPRB-206ENST00000548122 CWF19L2Q2TBE0 894 aaKnown RBP6.79□□□□□ -1.32
PTPRB-206ENST00000548122 NOL10Q9BSC4 688 aaKnown RBP6.79□□□□□ -1.32
PTPRB-206ENST00000548122 CT47B1P0C2W7 299 aaPredicted RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 METTL24Q5JXM2 366 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 LDHAL6AQ6ZMR3 332 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 SLC4A9Q96Q91 983 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 NOB1Q9ULX3 412 aaKnown RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 MYOM1P52179 1685 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 RGPD5Q99666 1765 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 PRR5LQ6MZQ0 368 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 LINS1Q8NG48 757 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 SIL1Q9H173 461 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 PARP4Q9UKK3 1724 aaKnown RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 PPEF1O14829 653 aaPredicted RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 PDE8AO60658 829 aa6.78□□□□□ -1.32
PTPRB-206ENST00000548122 RBM26Q5T8P6 1007 aaKnown RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 DZIP1LQ8IYY4 767 aaKnown RBP6.78□□□□□ -1.32
PTPRB-206ENST00000548122 RTKN2Q8IZC4 609 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms