RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ST5P78524 1137 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 NEUROD2Q15784 382 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 CLEC4GQ6UXB4 293 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 C3orf67Q6ZVT6 689 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 C16orf71Q8IYS4 520 aaPredicted RBP8.83□□□□□ -1
SCAF11-211ENST00000547950 RRAGCQ9HB90 399 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 PDZRN3Q9UPQ7 1066 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 NIP7Q9Y221 180 aaKnown RBP eCLIP8.83□□□□□ -1
SCAF11-211ENST00000547950 ADAMTS7Q9UKP4 1686 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 ST18O60284 1047 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 TOMM70O94826 608 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 MYL6BP14649 208 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 HSPA6P17066 643 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
SCAF11-211ENST00000547950 HLFQ16534 295 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 TPTE2Q6XPS3 522 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 CCDC146Q8IYE0 955 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 TSPYL4Q9UJ04 414 aa8.82□□□□□ -1
SCAF11-211ENST00000547950 KDM2BQ8NHM5 1336 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 SRGNP10124 158 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
SCAF11-211ENST00000547950 LMNB1P20700 586 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 TMPOP42166 694 aaKnown RBP8.81□□□□□ -1
SCAF11-211ENST00000547950 PRELPP51888 382 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 DPY19L2Q6NUT2 758 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 CNKSR1Q969H4 720 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 PCDH10Q9P2E7 1040 aa8.81□□□□□ -1
SCAF11-211ENST00000547950 LAS1LQ9Y4W2 734 aaKnown RBP8.81□□□□□ -1
SCAF11-211ENST00000547950 N4BP2Q86UW6 1770 aaPredicted RBP8.81□□□□□ -1
SCAF11-211ENST00000547950 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
SCAF11-211ENST00000547950 NFKBIEO00221 500 aa8.8□□□□□ -1
SCAF11-211ENST00000547950 WDR43Q15061 677 aaKnown RBP eCLIP8.8□□□□□ -1
SCAF11-211ENST00000547950 STYK1Q6J9G0 422 aa8.8□□□□□ -1
SCAF11-211ENST00000547950 PRPF40BQ6NWY9 871 aaKnown RBP8.8□□□□□ -1
SCAF11-211ENST00000547950 KIF6Q6ZMV9 814 aa8.8□□□□□ -1
SCAF11-211ENST00000547950 TTLL7Q6ZT98 887 aa8.8□□□□□ -1
SCAF11-211ENST00000547950 MASTLQ96GX5 879 aa8.8□□□□□ -1
SCAF11-211ENST00000547950 ZBTB3Q9H5J0 574 aa8.8□□□□□ -1
SCAF11-211ENST00000547950 ERVV-1B6SEH8 477 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 G3V3G9 751 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 NPR1P16066 1061 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 GPTP24298 496 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 LMOD3Q0VAK6 560 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 ERFEQ4G0M1 354 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 NECTIN2Q92692 538 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 ADAMTS8Q9UP79 889 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 MAP3K15Q6ZN16 1313 aa8.79□□□□□ -1
SCAF11-211ENST00000547950 KIF13BQ9NQT8 1826 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 KIAA1551Q9HCM1 1747 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 GLTPD2A6NH11 291 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 SNPHO15079 494 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 RGL2O15211 777 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 ANXA1P04083 346 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 NUTM1Q86Y26 1132 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
SCAF11-211ENST00000547950 RUNDC1Q96C34 613 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 UBR2Q8IWV8 1755 aa8.78□□□□□ -1
SCAF11-211ENST00000547950 KLRG2A4D1S0 409 aaPredicted RBP8.77□□□□□ -1.01
SCAF11-211ENST00000547950 VEGFAP15692 232 aaPredicted RBP8.77□□□□□ -1.01
SCAF11-211ENST00000547950 APLP1P51693 650 aa8.77□□□□□ -1.01
SCAF11-211ENST00000547950 AIMP1Q12904 312 aaKnown RBP8.77□□□□□ -1.01
SCAF11-211ENST00000547950 SUSD4Q5VX71 490 aa8.77□□□□□ -1.01
SCAF11-211ENST00000547950 OLFM4Q6UX06 510 aa8.77□□□□□ -1.01
SCAF11-211ENST00000547950 NYXQ9GZU5 481 aa8.77□□□□□ -1.01
SCAF11-211ENST00000547950 TAOK3Q9H2K8 898 aa8.77□□□□□ -1.01
SCAF11-211ENST00000547950 BABAM1Q9NWV8 329 aa8.77□□□□□ -1.01
SCAF11-211ENST00000547950 CHL1O00533 1208 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 ALDH1B1P30837 517 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 FSTL1Q12841 308 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 PDIA6Q15084 440 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 KRT24Q2M2I5 525 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 PROSER3Q2NL68 480 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 SOGA3Q5TF21 947 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 C7orf43Q8WVR3 580 aa8.76□□□□□ -1.01
SCAF11-211ENST00000547950 PRKRIP1Q9H875 184 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-211ENST00000547950 ZC3H4Q9UPT8 1303 aaKnown RBP8.76□□□□□ -1.01
SCAF11-211ENST00000547950 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
SCAF11-211ENST00000547950 TCERG1O14776 1098 aaKnown RBP8.75□□□□□ -1.01
SCAF11-211ENST00000547950 DDNO94850 711 aaPredicted RBP8.75□□□□□ -1.01
SCAF11-211ENST00000547950 HTRA3P83110 453 aa8.75□□□□□ -1.01
SCAF11-211ENST00000547950 CCDC93Q567U6 631 aa8.75□□□□□ -1.01
SCAF11-211ENST00000547950 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
SCAF11-211ENST00000547950 COPS6Q7L5N1 327 aa8.75□□□□□ -1.01
SCAF11-211ENST00000547950 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
SCAF11-211ENST00000547950 ZNF34Q8IZ26 560 aa8.75□□□□□ -1.01
SCAF11-211ENST00000547950 RPGRQ92834 1020 aaKnown RBP8.75□□□□□ -1.01
SCAF11-211ENST00000547950 ZNF277Q9NRM2 450 aaPredicted RBP8.75□□□□□ -1.01
SCAF11-211ENST00000547950 ERBB4Q15303 1308 aa8.75□□□□□ -1.01
SCAF11-211ENST00000547950 SIPA1L3O60292 1781 aaPredicted RBP8.74□□□□□ -1.01
SCAF11-211ENST00000547950 POTECB2RU33 542 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 APAF1O14727 1248 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 LRP10Q7Z4F1 713 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 PPP1R42Q7Z4L9 355 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 RTKN2Q8IZC4 609 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 SYNE4Q8N205 404 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 SMC1BQ8NDV3 1235 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 XAGE3Q8WTP9 111 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
SCAF11-211ENST00000547950 UTP14AQ9BVJ6 771 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms