RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 EPS15P42566 896 aa19.43■□□□□ 0.7
PTPRB-205ENST00000547715 HLFQ16534 295 aa19.43■□□□□ 0.7
PTPRB-205ENST00000547715 NUP98P52948 1817 aa19.42■□□□□ 0.7
PTPRB-205ENST00000547715 SCNN1DP51172 638 aa19.42■□□□□ 0.7
PTPRB-205ENST00000547715 CRY2Q49AN0 593 aa19.41■□□□□ 0.7
PTPRB-205ENST00000547715 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
PTPRB-205ENST00000547715 MCM10Q7L590 875 aa19.41■□□□□ 0.7
PTPRB-205ENST00000547715 LARGE2Q8N3Y3 721 aa19.41■□□□□ 0.7
PTPRB-205ENST00000547715 RTF1Q92541 710 aaKnown RBP19.41■□□□□ 0.7
PTPRB-205ENST00000547715 TSKSQ9UJT2 592 aa19.41■□□□□ 0.7
PTPRB-205ENST00000547715 TRAF5O00463 557 aa19.4■□□□□ 0.7
PTPRB-205ENST00000547715 CST9Q5W186 159 aa19.4■□□□□ 0.7
PTPRB-205ENST00000547715 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
PTPRB-205ENST00000547715 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
PTPRB-205ENST00000547715 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
PTPRB-205ENST00000547715 ABCC12Q96J65 1359 aa19.4■□□□□ 0.7
PTPRB-205ENST00000547715 LAMB4A4D0S4 1761 aa19.39■□□□□ 0.7
PTPRB-205ENST00000547715 USP50Q70EL3 339 aaPredicted RBP19.39■□□□□ 0.69
PTPRB-205ENST00000547715 NYXQ9GZU5 481 aa19.39■□□□□ 0.69
PTPRB-205ENST00000547715 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
PTPRB-205ENST00000547715 RGS19P49795 217 aa19.38■□□□□ 0.69
PTPRB-205ENST00000547715 NGEFQ8N5V2 710 aa19.38■□□□□ 0.69
PTPRB-205ENST00000547715 CFAP44Q96MT7 982 aa19.38■□□□□ 0.69
PTPRB-205ENST00000547715 TLL2Q9Y6L7 1015 aa19.38■□□□□ 0.69
PTPRB-205ENST00000547715 TNRC18O15417 2968 aaPredicted RBP19.38■□□□□ 0.69
PTPRB-205ENST00000547715 TCERG1O14776 1098 aaKnown RBP19.37■□□□□ 0.69
PTPRB-205ENST00000547715 AOC2O75106 756 aa19.37■□□□□ 0.69
PTPRB-205ENST00000547715 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
PTPRB-205ENST00000547715 MAP2K2P36507 400 aa19.36■□□□□ 0.69
PTPRB-205ENST00000547715 GRIPAP1Q4V328 841 aa19.36■□□□□ 0.69
PTPRB-205ENST00000547715 NPC1L1Q9UHC9 1359 aa19.35■□□□□ 0.69
PTPRB-205ENST00000547715 HOXA10P31260 410 aaPredicted RBP19.35■□□□□ 0.69
PTPRB-205ENST00000547715 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
PTPRB-205ENST00000547715 NIM1KQ8IY84 436 aa19.35■□□□□ 0.69
PTPRB-205ENST00000547715 CFAP53Q96M91 514 aa19.35■□□□□ 0.69
PTPRB-205ENST00000547715 PPEF1O14829 653 aaPredicted RBP19.34■□□□□ 0.69
PTPRB-205ENST00000547715 SAPCD2Q86UD0 394 aa19.34■□□□□ 0.69
PTPRB-205ENST00000547715 ERVV-1B6SEH8 477 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 PPIP5K2O43314 1243 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 GPTP24298 496 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 RBM17Q96I25 401 aaKnown RBP19.33■□□□□ 0.68
PTPRB-205ENST00000547715 ADARB2Q9NS39 739 aaKnown RBP19.33■□□□□ 0.68
PTPRB-205ENST00000547715 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 GPRC5DQ9NZD1 345 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 NUDCQ9Y266 331 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 RIC1Q4ADV7 1423 aa19.33■□□□□ 0.68
PTPRB-205ENST00000547715 MAP3K15Q6ZN16 1313 aa19.32■□□□□ 0.68
PTPRB-205ENST00000547715 CA12O43570 354 aa19.32■□□□□ 0.68
PTPRB-205ENST00000547715 CELF2O95319 508 aaKnown RBP19.32■□□□□ 0.68
PTPRB-205ENST00000547715 U2AF1L5P0DN76 240 aaPredicted RBP19.32■□□□□ 0.68
PTPRB-205ENST00000547715 U2AF1Q01081 240 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTPRB-205ENST00000547715 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
PTPRB-205ENST00000547715 AOC3Q16853 763 aa19.32■□□□□ 0.68
PTPRB-205ENST00000547715 KIF6Q6ZMV9 814 aa19.32■□□□□ 0.68
PTPRB-205ENST00000547715 CRAMP1Q96RY5 1269 aa19.32■□□□□ 0.68
PTPRB-205ENST00000547715 MCOLN1Q9GZU1 580 aa19.32■□□□□ 0.68
PTPRB-205ENST00000547715 UBN2Q6ZU65 1347 aa19.31■□□□□ 0.68
PTPRB-205ENST00000547715 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
PTPRB-205ENST00000547715 RRP7AQ9Y3A4 280 aaKnown RBP19.31■□□□□ 0.68
PTPRB-205ENST00000547715 PDE4DIPQ5VU43 2346 aa19.3■□□□□ 0.68
PTPRB-205ENST00000547715 HTATSF1O43719 755 aaKnown RBP19.3■□□□□ 0.68
PTPRB-205ENST00000547715 SUSD4Q5VX71 490 aa19.3■□□□□ 0.68
PTPRB-205ENST00000547715 TTLL7Q6ZT98 887 aa19.3■□□□□ 0.68
PTPRB-205ENST00000547715 GLIS2Q9BZE0 524 aaPredicted RBP19.3■□□□□ 0.68
PTPRB-205ENST00000547715 ZBTB3Q9H5J0 574 aa19.3■□□□□ 0.68
PTPRB-205ENST00000547715 ZNF408Q9H9D4 720 aa19.3■□□□□ 0.68
PTPRB-205ENST00000547715 IBTKQ9P2D0 1353 aaPredicted RBP19.3■□□□□ 0.68
PTPRB-205ENST00000547715 KDM3BQ7LBC6 1761 aa19.29■□□□□ 0.68
PTPRB-205ENST00000547715 MYL6BP14649 208 aa19.29■□□□□ 0.68
PTPRB-205ENST00000547715 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
PTPRB-205ENST00000547715 CXCL9Q07325 125 aa19.29■□□□□ 0.68
PTPRB-205ENST00000547715 PCDH10Q9P2E7 1040 aa19.29■□□□□ 0.68
PTPRB-205ENST00000547715 DLG5Q8TDM6 1919 aa19.29■□□□□ 0.68
PTPRB-205ENST00000547715 DGKZQ13574 1117 aa19.28■□□□□ 0.68
PTPRB-205ENST00000547715 C3orf67Q6ZVT6 689 aa19.28■□□□□ 0.68
PTPRB-205ENST00000547715 HHIPL1Q96JK4 782 aa19.28■□□□□ 0.68
PTPRB-205ENST00000547715 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
PTPRB-205ENST00000547715 GMPSP49915 693 aaPredicted RBP19.27■□□□□ 0.68
PTPRB-205ENST00000547715 CIAPIN1Q6FI81 312 aa19.27■□□□□ 0.68
PTPRB-205ENST00000547715 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.68
PTPRB-205ENST00000547715 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
PTPRB-205ENST00000547715 NTSR2O95665 410 aa19.26■□□□□ 0.67
PTPRB-205ENST00000547715 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
PTPRB-205ENST00000547715 NLRP3Q96P20 1036 aa19.26■□□□□ 0.67
PTPRB-205ENST00000547715 BCL2L13Q9BXK5 485 aa19.26■□□□□ 0.67
PTPRB-205ENST00000547715 ATP6V0A2Q9Y487 856 aa19.26■□□□□ 0.67
PTPRB-205ENST00000547715 PPP1R42Q7Z4L9 355 aa19.25■□□□□ 0.67
PTPRB-205ENST00000547715 SUPT20HQ8NEM7 779 aa19.25■□□□□ 0.67
PTPRB-205ENST00000547715 PGAP2Q9UHJ9 254 aa19.25■□□□□ 0.67
PTPRB-205ENST00000547715 GIGYF2Q6Y7W6 1299 aaKnown RBP19.24■□□□□ 0.67
PTPRB-205ENST00000547715 LAMB2P55268 1798 aa19.24■□□□□ 0.67
PTPRB-205ENST00000547715 RAD17O75943 681 aa19.23■□□□□ 0.67
PTPRB-205ENST00000547715 HIRAP54198 1017 aaPredicted RBP19.23■□□□□ 0.67
PTPRB-205ENST00000547715 NOGQ13253 232 aa19.23■□□□□ 0.67
PTPRB-205ENST00000547715 DPP8Q6V1X1 898 aaPredicted RBP19.23■□□□□ 0.67
PTPRB-205ENST00000547715 CDC37L1Q7L3B6 337 aa19.23■□□□□ 0.67
PTPRB-205ENST00000547715 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
PTPRB-205ENST00000547715 ZC3H15Q8WU90 426 aaKnown RBP19.23■□□□□ 0.67
PTPRB-205ENST00000547715 ABCC4O15439 1325 aa19.23■□□□□ 0.67
PTPRB-205ENST00000547715 CDHR2Q9BYE9 1310 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms