RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
LINC02409-201ENST00000547515 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
LINC02409-201ENST00000547515 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 SRGNP10124 158 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
LINC02409-201ENST00000547515 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 STYK1Q6J9G0 422 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 NLRP10Q86W26 655 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 TAF1P21675 1872 aa13.19□□□□□ -0.3
LINC02409-201ENST00000547515 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
LINC02409-201ENST00000547515 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
LINC02409-201ENST00000547515 TRIM28Q13263 835 aaKnown RBP13.18□□□□□ -0.3
LINC02409-201ENST00000547515 ERFEQ4G0M1 354 aa13.18□□□□□ -0.3
LINC02409-201ENST00000547515 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
LINC02409-201ENST00000547515 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
LINC02409-201ENST00000547515 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
LINC02409-201ENST00000547515 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
LINC02409-201ENST00000547515 YY1P25490 414 aa13.17□□□□□ -0.3
LINC02409-201ENST00000547515 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
LINC02409-201ENST00000547515 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
LINC02409-201ENST00000547515 G2E3Q7L622 706 aa13.17□□□□□ -0.3
LINC02409-201ENST00000547515 RIC3Q7Z5B4 369 aa13.17□□□□□ -0.3
LINC02409-201ENST00000547515 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
LINC02409-201ENST00000547515 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC02409-201ENST00000547515 NPR1P16066 1061 aa13.16□□□□□ -0.3
LINC02409-201ENST00000547515 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
LINC02409-201ENST00000547515 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
LINC02409-201ENST00000547515 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
LINC02409-201ENST00000547515 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
LINC02409-201ENST00000547515 ADCY9O60503 1353 aa13.16□□□□□ -0.3
LINC02409-201ENST00000547515 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
LINC02409-201ENST00000547515 FLIIQ13045 1269 aa13.15□□□□□ -0.3
LINC02409-201ENST00000547515 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
LINC02409-201ENST00000547515 PI4KAP2A4QPH2 592 aa13.14□□□□□ -0.31
LINC02409-201ENST00000547515 ARHGAP27Q6ZUM4 889 aa13.14□□□□□ -0.31
LINC02409-201ENST00000547515 PI4KAP1Q8N8J0 262 aa13.14□□□□□ -0.31
LINC02409-201ENST00000547515 MYD88Q99836 296 aa13.14□□□□□ -0.31
LINC02409-201ENST00000547515 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
LINC02409-201ENST00000547515 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
LINC02409-201ENST00000547515 HOXA10P31260 410 aaPredicted RBP13.13□□□□□ -0.31
LINC02409-201ENST00000547515 PRPF40BQ6NWY9 871 aaKnown RBP13.13□□□□□ -0.31
LINC02409-201ENST00000547515 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
LINC02409-201ENST00000547515 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
LINC02409-201ENST00000547515 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
LINC02409-201ENST00000547515 ALDH1B1P30837 517 aa13.12□□□□□ -0.31
LINC02409-201ENST00000547515 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
LINC02409-201ENST00000547515 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
LINC02409-201ENST00000547515 C7orf43Q8WVR3 580 aa13.12□□□□□ -0.31
LINC02409-201ENST00000547515 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
LINC02409-201ENST00000547515 TIAM2Q8IVF5 1701 aa13.12□□□□□ -0.31
LINC02409-201ENST00000547515 C21orf2O43822 256 aa13.11□□□□□ -0.31
LINC02409-201ENST00000547515 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
LINC02409-201ENST00000547515 HCLS1P14317 486 aaPredicted RBP13.11□□□□□ -0.31
LINC02409-201ENST00000547515 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC02409-201ENST00000547515 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
LINC02409-201ENST00000547515 ZBTB38Q8NAP3 1195 aaPredicted RBP13.11□□□□□ -0.31
LINC02409-201ENST00000547515 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
LINC02409-201ENST00000547515 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
LINC02409-201ENST00000547515 FAM89AQ96GI7 184 aa13.11□□□□□ -0.31
LINC02409-201ENST00000547515 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
LINC02409-201ENST00000547515 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
LINC02409-201ENST00000547515 PCCAP05165 728 aaPredicted RBP13.1□□□□□ -0.31
LINC02409-201ENST00000547515 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
LINC02409-201ENST00000547515 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
LINC02409-201ENST00000547515 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
LINC02409-201ENST00000547515 LRRC37AA6NMS7 1700 aa13.1□□□□□ -0.31
LINC02409-201ENST00000547515 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 NFKBIEO00221 500 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 IRS4O14654 1257 aaPredicted RBP13.09□□□□□ -0.31
LINC02409-201ENST00000547515 RASSF7Q02833 373 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
LINC02409-201ENST00000547515 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
LINC02409-201ENST00000547515 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
LINC02409-201ENST00000547515 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 LTBP3Q9NS15 1303 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 SPEF2Q9C093 1822 aa13.09□□□□□ -0.31
LINC02409-201ENST00000547515 HSP90B1P14625 803 aaKnown RBP13.08□□□□□ -0.32
LINC02409-201ENST00000547515 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
LINC02409-201ENST00000547515 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
LINC02409-201ENST00000547515 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
LINC02409-201ENST00000547515 F6X3S4 739 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 PRELPP51888 382 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 CWF19L2Q2TBE0 894 aaKnown RBP13.07□□□□□ -0.32
LINC02409-201ENST00000547515 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
LINC02409-201ENST00000547515 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 CC2D2BQ6DHV5 1058 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 ABCC4O15439 1325 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
LINC02409-201ENST00000547515 COL4A1P02462 1669 aa13.06□□□□□ -0.32
LINC02409-201ENST00000547515 H7C1W4 665 aa13.06□□□□□ -0.32
LINC02409-201ENST00000547515 PDE8AO60658 829 aa13.06□□□□□ -0.32
LINC02409-201ENST00000547515 LMNB1P20700 586 aa13.06□□□□□ -0.32
LINC02409-201ENST00000547515 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
LINC02409-201ENST00000547515 GCKRQ14397 625 aa13.06□□□□□ -0.32
LINC02409-201ENST00000547515 BEND3Q5T5X7 828 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms