RNA–Protein interactions for RNA: ENST00000547113.1

PRICKLE1-204, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-204ENST00000547113 RPGRQ92834 1020 aaKnown RBP23.33■■□□□ 1.33
PRICKLE1-204ENST00000547113 NLRP3Q96P20 1036 aa23.33■■□□□ 1.33
PRICKLE1-204ENST00000547113 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.32
PRICKLE1-204ENST00000547113 C7orf43Q8WVR3 580 aa23.32■■□□□ 1.32
PRICKLE1-204ENST00000547113 TRMT112Q9UI30 125 aaKnown RBP23.32■■□□□ 1.32
PRICKLE1-204ENST00000547113 RIC1Q4ADV7 1423 aa23.32■■□□□ 1.32
PRICKLE1-204ENST00000547113 NUP98P52948 1817 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 GOLGA2Q08379 1002 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 CCDC93Q567U6 631 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 RIC3Q7Z5B4 369 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 TSPYL6Q8N831 410 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 RBM17Q96I25 401 aaKnown RBP23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 TAOK3Q9H2K8 898 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 LTBP3Q9NS15 1303 aa23.31■■□□□ 1.32
PRICKLE1-204ENST00000547113 COL11A2P13942 1736 aaPredicted RBP23.3■■□□□ 1.32
PRICKLE1-204ENST00000547113 HOXA10P31260 410 aaPredicted RBP23.3■■□□□ 1.32
PRICKLE1-204ENST00000547113 PRELPP51888 382 aa23.3■■□□□ 1.32
PRICKLE1-204ENST00000547113 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
PRICKLE1-204ENST00000547113 TWISTNBQ3B726 338 aaPredicted RBP23.29■■□□□ 1.32
PRICKLE1-204ENST00000547113 RTKN2Q8IZC4 609 aa23.29■■□□□ 1.32
PRICKLE1-204ENST00000547113 ISCA1Q9BUE6 129 aa23.29■■□□□ 1.32
PRICKLE1-204ENST00000547113 KIF3CO14782 793 aa23.28■■□□□ 1.32
PRICKLE1-204ENST00000547113 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
PRICKLE1-204ENST00000547113 CRAMP1Q96RY5 1269 aa23.28■■□□□ 1.32
PRICKLE1-204ENST00000547113 STK31Q9BXU1 1019 aa23.28■■□□□ 1.32
PRICKLE1-204ENST00000547113 SH3TC1Q8TE82 1336 aa23.28■■□□□ 1.32
PRICKLE1-204ENST00000547113 ATP5J2-PTCD1G3V325 749 aa23.27■■□□□ 1.32
PRICKLE1-204ENST00000547113 TRIM28Q13263 835 aaKnown RBP23.26■■□□□ 1.31
PRICKLE1-204ENST00000547113 CC2D2BQ6DHV5 1058 aa23.26■■□□□ 1.31
PRICKLE1-204ENST00000547113 HCLS1P14317 486 aaPredicted RBP23.25■■□□□ 1.31
PRICKLE1-204ENST00000547113 FKBP4Q02790 459 aaKnown RBP eCLIP23.25■■□□□ 1.31
PRICKLE1-204ENST00000547113 C3orf67Q6ZVT6 689 aa23.25■■□□□ 1.31
PRICKLE1-204ENST00000547113 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
PRICKLE1-204ENST00000547113 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
PRICKLE1-204ENST00000547113 GLTPD2A6NH11 291 aa23.24■■□□□ 1.31
PRICKLE1-204ENST00000547113 GRIPAP1Q4V328 841 aa23.24■■□□□ 1.31
PRICKLE1-204ENST00000547113 DPY19L2Q6NUT2 758 aa23.24■■□□□ 1.31
PRICKLE1-204ENST00000547113 SYNE4Q8N205 404 aa23.24■■□□□ 1.31
PRICKLE1-204ENST00000547113 TMX4Q9H1E5 349 aaPredicted RBP23.24■■□□□ 1.31
PRICKLE1-204ENST00000547113 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
PRICKLE1-204ENST00000547113 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
PRICKLE1-204ENST00000547113 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
PRICKLE1-204ENST00000547113 ZNF428Q96B54 188 aa23.22■■□□□ 1.31
PRICKLE1-204ENST00000547113 FAM89AQ96GI7 184 aa23.22■■□□□ 1.31
PRICKLE1-204ENST00000547113 MYD88Q99836 296 aa23.22■■□□□ 1.31
PRICKLE1-204ENST00000547113 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
PRICKLE1-204ENST00000547113 RRAGCQ9HB90 399 aa23.22■■□□□ 1.31
PRICKLE1-204ENST00000547113 TCERG1O14776 1098 aaKnown RBP23.21■■□□□ 1.31
PRICKLE1-204ENST00000547113 PPEF1O14829 653 aaPredicted RBP23.21■■□□□ 1.31
PRICKLE1-204ENST00000547113 TOMM70O94826 608 aa23.21■■□□□ 1.31
PRICKLE1-204ENST00000547113 SLC4A2P04920 1241 aa23.21■■□□□ 1.31
PRICKLE1-204ENST00000547113 DDX46Q7L014 1031 aaKnown RBP23.21■■□□□ 1.31
PRICKLE1-204ENST00000547113 TNRC6CQ9HCJ0 1690 aaKnown RBP23.21■■□□□ 1.31
PRICKLE1-204ENST00000547113 BBOX1O75936 387 aa23.2■■□□□ 1.3
PRICKLE1-204ENST00000547113 EXOSC9Q06265 439 aaKnown RBP23.2■■□□□ 1.3
PRICKLE1-204ENST00000547113 KSR2Q6VAB6 950 aa23.2■■□□□ 1.3
PRICKLE1-204ENST00000547113 CCDC191Q8NCU4 936 aa23.2■■□□□ 1.3
PRICKLE1-204ENST00000547113 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.3
PRICKLE1-204ENST00000547113 HSP90B1P14625 803 aaKnown RBP23.19■■□□□ 1.3
PRICKLE1-204ENST00000547113 PSMD1Q99460 953 aa23.19■■□□□ 1.3
PRICKLE1-204ENST00000547113 ZNF277Q9NRM2 450 aaPredicted RBP23.19■■□□□ 1.3
PRICKLE1-204ENST00000547113 MAP3K2Q9Y2U5 619 aa23.19■■□□□ 1.3
PRICKLE1-204ENST00000547113 SBF1O95248 1867 aa23.19■■□□□ 1.3
PRICKLE1-204ENST00000547113 ABCC4O15439 1325 aa23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 PI4KAP2A4QPH2 592 aa23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 VAMP4O75379 141 aa23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 PI4KAP1Q8N8J0 262 aa23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 ZBTB38Q8NAP3 1195 aaPredicted RBP23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 SPINK5Q9NQ38 1064 aaPredicted RBP23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 ARFGEF2Q9Y6D5 1785 aa23.18■■□□□ 1.3
PRICKLE1-204ENST00000547113 CCER2I3L3R5 266 aa23.17■■□□□ 1.3
PRICKLE1-204ENST00000547113 IRS4O14654 1257 aaPredicted RBP23.17■■□□□ 1.3
PRICKLE1-204ENST00000547113 VEGFAP15692 232 aaPredicted RBP23.17■■□□□ 1.3
PRICKLE1-204ENST00000547113 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
PRICKLE1-204ENST00000547113 CWC25Q9NXE8 425 aaPredicted RBP23.17■■□□□ 1.3
PRICKLE1-204ENST00000547113 ATP6V0A2Q9Y487 856 aa23.17■■□□□ 1.3
PRICKLE1-204ENST00000547113 FER1L6Q2WGJ9 1857 aa23.16■■□□□ 1.3
PRICKLE1-204ENST00000547113 NEXNQ0ZGT2 675 aa23.16■■□□□ 1.3
PRICKLE1-204ENST00000547113 SF3B3Q15393 1217 aaKnown RBP23.16■■□□□ 1.3
PRICKLE1-204ENST00000547113 ANKRD36CQ5JPF3 1778 aa23.15■■□□□ 1.3
PRICKLE1-204ENST00000547113 GRAPQ13588 217 aa23.15■■□□□ 1.3
PRICKLE1-204ENST00000547113 G2E3Q7L622 706 aa23.15■■□□□ 1.3
PRICKLE1-204ENST00000547113 GRAPLQ8TC17 118 aaPredicted RBP23.15■■□□□ 1.3
PRICKLE1-204ENST00000547113 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.29
PRICKLE1-204ENST00000547113 FLIIQ13045 1269 aa23.14■■□□□ 1.29
PRICKLE1-204ENST00000547113 TMC4Q7Z404 712 aa23.14■■□□□ 1.29
PRICKLE1-204ENST00000547113 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
PRICKLE1-204ENST00000547113 RBM46Q8TBY0 533 aaKnown RBP23.14■■□□□ 1.29
PRICKLE1-204ENST00000547113 JDP2Q8WYK2 163 aa23.14■■□□□ 1.29
PRICKLE1-204ENST00000547113 ZNF521Q96K83 1311 aa23.12■■□□□ 1.29
PRICKLE1-204ENST00000547113 CACNA1SQ13698 1873 aa23.12■■□□□ 1.29
PRICKLE1-204ENST00000547113 SNED1Q8TER0 1413 aa23.12■■□□□ 1.29
PRICKLE1-204ENST00000547113 DDNO94850 711 aaPredicted RBP23.11■■□□□ 1.29
PRICKLE1-204ENST00000547113 HSPA6P17066 643 aa23.11■■□□□ 1.29
PRICKLE1-204ENST00000547113 FKBP5Q13451 457 aaPredicted RBP23.11■■□□□ 1.29
PRICKLE1-204ENST00000547113 SUPT20HQ8NEM7 779 aa23.11■■□□□ 1.29
PRICKLE1-204ENST00000547113 PDE8AO60658 829 aa23.1■■□□□ 1.29
PRICKLE1-204ENST00000547113 IGKV5-2P06315 115 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms