RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 ZBTB3Q9H5J0 574 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 AFDNP55196 1824 aaKnown RBP22.6■■□□□ 1.21
VDR-204ENST00000547065 STARD3NLO95772 234 aa22.6■■□□□ 1.21
VDR-204ENST00000547065 NUCB2P80303 420 aa22.59■■□□□ 1.21
VDR-204ENST00000547065 TOGARAM1Q9Y4F4 1720 aa22.59■■□□□ 1.21
VDR-204ENST00000547065 DNAJC10Q8IXB1 793 aa22.58■■□□□ 1.21
VDR-204ENST00000547065 AK9Q5TCS8 1911 aa22.58■■□□□ 1.21
VDR-204ENST00000547065 PTMSP20962 102 aa22.58■■□□□ 1.2
VDR-204ENST00000547065 TFCP2Q12800 502 aa22.58■■□□□ 1.2
VDR-204ENST00000547065 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.2
VDR-204ENST00000547065 TNNI3KQ59H18 835 aa22.58■■□□□ 1.2
VDR-204ENST00000547065 ISCA1Q9BUE6 129 aa22.58■■□□□ 1.2
VDR-204ENST00000547065 TLR7Q9NYK1 1049 aaKnown RBP22.58■■□□□ 1.2
VDR-204ENST00000547065 FPGT-TNNI3KV9GXZ4 949 aa22.58■■□□□ 1.2
VDR-204ENST00000547065 TCIRG1Q13488 830 aa22.57■■□□□ 1.2
VDR-204ENST00000547065 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
VDR-204ENST00000547065 CLEC17AQ6ZS10 378 aa22.56■■□□□ 1.2
VDR-204ENST00000547065 ATP5JP18859 108 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 TMX3Q96JJ7 454 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 BOLA2Q9H3K6 86 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 TRAK2O60296 914 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 BCL9O00512 1426 aa22.55■■□□□ 1.2
VDR-204ENST00000547065 SSFA2P28290 1259 aa22.54■■□□□ 1.2
VDR-204ENST00000547065 CHMP3Q9Y3E7 222 aa22.54■■□□□ 1.2
VDR-204ENST00000547065 SNX14Q9Y5W7 946 aa22.54■■□□□ 1.2
VDR-204ENST00000547065 COL16A1Q07092 1604 aaPredicted RBP22.54■■□□□ 1.2
VDR-204ENST00000547065 CUL4AQ13619 759 aa22.53■■□□□ 1.2
VDR-204ENST00000547065 THRAP3Q9Y2W1 955 aaKnown RBP22.53■■□□□ 1.2
VDR-204ENST00000547065 LTBP4Q8N2S1 1624 aa22.53■■□□□ 1.2
VDR-204ENST00000547065 LRP6O75581 1613 aa22.53■■□□□ 1.2
VDR-204ENST00000547065 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
VDR-204ENST00000547065 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
VDR-204ENST00000547065 DBNLQ9UJU6 430 aaKnown RBP22.53■■□□□ 1.2
VDR-204ENST00000547065 CYP2E1P05181 493 aaPredicted RBP22.51■■□□□ 1.19
VDR-204ENST00000547065 IL15P40933 162 aaPredicted RBP22.51■■□□□ 1.19
VDR-204ENST00000547065 KCNB2Q92953 911 aa22.51■■□□□ 1.19
VDR-204ENST00000547065 INTS4Q96HW7 963 aaKnown RBP22.51■■□□□ 1.19
VDR-204ENST00000547065 FSD1Q9BTV5 496 aa22.51■■□□□ 1.19
VDR-204ENST00000547065 PLCH1Q4KWH8 1693 aa22.51■■□□□ 1.19
VDR-204ENST00000547065 ATG9AQ7Z3C6 839 aa22.5■■□□□ 1.19
VDR-204ENST00000547065 ZGPATQ8N5A5 531 aaKnown RBP22.5■■□□□ 1.19
VDR-204ENST00000547065 UPF3BQ9BZI7 483 aaKnown RBP22.5■■□□□ 1.19
VDR-204ENST00000547065 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
VDR-204ENST00000547065 MAP3K15Q6ZN16 1313 aa22.5■■□□□ 1.19
VDR-204ENST00000547065 CYP19A1P11511 503 aaPredicted RBP22.5■■□□□ 1.19
VDR-204ENST00000547065 PTH1RQ03431 593 aa22.5■■□□□ 1.19
VDR-204ENST00000547065 NMIQ13287 307 aaPredicted RBP22.5■■□□□ 1.19
VDR-204ENST00000547065 SKOR2Q2VWA4 1001 aaPredicted RBP22.5■■□□□ 1.19
VDR-204ENST00000547065 CIAO1O76071 339 aa22.49■■□□□ 1.19
VDR-204ENST00000547065 PCCAP05165 728 aaPredicted RBP22.49■■□□□ 1.19
VDR-204ENST00000547065 RASEFQ8IZ41 740 aa22.49■■□□□ 1.19
VDR-204ENST00000547065 SPATA31A1Q5TZJ5 1347 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 GOLGA6L22H0YM25 854 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 EYA2O00167 538 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 ADAMTS2O95450 1211 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 HSP90AB3PQ58FF7 597 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 GIGYF2Q6Y7W6 1299 aaKnown RBP22.48■■□□□ 1.19
VDR-204ENST00000547065 FAM227BQ96M60 508 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 PLA2G12BQ9BX93 195 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 CCDC171Q6TFL3 1326 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 ITGB4P16144 1822 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 BAG4O95429 457 aaKnown RBP22.48■■□□□ 1.19
VDR-204ENST00000547065 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
VDR-204ENST00000547065 SLC4A9Q96Q91 983 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 DBNDD2Q9BQY9 259 aa22.48■■□□□ 1.19
VDR-204ENST00000547065 TJP1Q07157 1748 aa22.47■■□□□ 1.19
VDR-204ENST00000547065 ZBTB38Q8NAP3 1195 aaPredicted RBP22.47■■□□□ 1.19
VDR-204ENST00000547065 MAP4K1Q92918 833 aa22.47■■□□□ 1.19
VDR-204ENST00000547065 SYTL4Q96C24 671 aaPredicted RBP22.47■■□□□ 1.19
VDR-204ENST00000547065 HAUS7Q99871 368 aa22.47■■□□□ 1.19
VDR-204ENST00000547065 TM6SF1Q9BZW5 370 aa22.47■■□□□ 1.19
VDR-204ENST00000547065 FBXO3Q9UK99 471 aa22.47■■□□□ 1.19
VDR-204ENST00000547065 NECTIN1Q15223 517 aa22.46■■□□□ 1.19
VDR-204ENST00000547065 TTC14Q96N46 770 aa22.46■■□□□ 1.19
VDR-204ENST00000547065 DDB1Q16531 1140 aa22.45■■□□□ 1.19
VDR-204ENST00000547065 CCDC57Q2TAC2 916 aa22.45■■□□□ 1.19
VDR-204ENST00000547065 PRPF40BQ6NWY9 871 aaKnown RBP22.45■■□□□ 1.19
VDR-204ENST00000547065 ARXQ96QS3 562 aa22.45■■□□□ 1.19
VDR-204ENST00000547065 RFX7Q2KHR2 1363 aa22.45■■□□□ 1.18
VDR-204ENST00000547065 ZKSCAN1P17029 563 aaPredicted RBP22.45■■□□□ 1.18
VDR-204ENST00000547065 TICAM2Q86XR7 235 aa22.45■■□□□ 1.18
VDR-204ENST00000547065 A0A0D9SFI3 127 aa22.44■■□□□ 1.18
VDR-204ENST00000547065 RBM8AQ9Y5S9 174 aaKnown RBP22.44■■□□□ 1.18
VDR-204ENST00000547065 CSF1RP07333 972 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 ZNF594Q96JF6 807 aaPredicted RBP22.43■■□□□ 1.18
VDR-204ENST00000547065 NEUROD6Q96NK8 337 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 CDHR2Q9BYE9 1310 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 PHLPP1O60346 1717 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 ERVV-1B6SEH8 477 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 TOM1O60784 492 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 IL6STP40189 918 aaPredicted RBP22.43■■□□□ 1.18
VDR-204ENST00000547065 KCNJ4P48050 445 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 NOL8Q76FK4 1167 aaKnown RBP22.43■■□□□ 1.18
VDR-204ENST00000547065 FAM89AQ96GI7 184 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 ZSWIM6Q9HCJ5 1215 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 LIMCH1Q9UPQ0 1083 aa22.43■■□□□ 1.18
VDR-204ENST00000547065 MED23Q9ULK4 1368 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms