RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MYD88Q99836 296 aa18.46■□□□□ 0.55
DDX54-203ENST00000546869 FAM177BA6PVY3 158 aa18.45■□□□□ 0.54
DDX54-203ENST00000546869 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
DDX54-203ENST00000546869 ERFEQ4G0M1 354 aa18.45■□□□□ 0.54
DDX54-203ENST00000546869 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
DDX54-203ENST00000546869 TRMT112Q9UI30 125 aaKnown RBP18.45■□□□□ 0.54
DDX54-203ENST00000546869 KIAA1551Q9HCM1 1747 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 IGKV5-2P06315 115 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 SRGNP10124 158 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 CRY2Q49AN0 593 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 ZBTB38Q8NAP3 1195 aaPredicted RBP18.44■□□□□ 0.54
DDX54-203ENST00000546869 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 ANKRD36CQ5JPF3 1778 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 ARFGEF2Q9Y6D5 1785 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
DDX54-203ENST00000546869 CHRNA5P30532 468 aa18.43■□□□□ 0.54
DDX54-203ENST00000546869 STYK1Q6J9G0 422 aa18.43■□□□□ 0.54
DDX54-203ENST00000546869 CCDC24Q8N4L8 307 aa18.43■□□□□ 0.54
DDX54-203ENST00000546869 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
DDX54-203ENST00000546869 CWC25Q9NXE8 425 aaPredicted RBP18.43■□□□□ 0.54
DDX54-203ENST00000546869 PCCAP05165 728 aaPredicted RBP18.42■□□□□ 0.54
DDX54-203ENST00000546869 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
DDX54-203ENST00000546869 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
DDX54-203ENST00000546869 MASTLQ96GX5 879 aa18.42■□□□□ 0.54
DDX54-203ENST00000546869 NEURL1BA8MQ27 555 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 NPR1P16066 1061 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 GPR162Q16538 588 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 BEND3Q5T5X7 828 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 NLRP3Q96P20 1036 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
DDX54-203ENST00000546869 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
DDX54-203ENST00000546869 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
DDX54-203ENST00000546869 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
DDX54-203ENST00000546869 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
DDX54-203ENST00000546869 FAM89AQ96GI7 184 aa18.4■□□□□ 0.54
DDX54-203ENST00000546869 ANKRD31Q8N7Z5 1873 aa18.39■□□□□ 0.54
DDX54-203ENST00000546869 F6X3S4 739 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 H7C1W4 665 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 ALDH1L1O75891 902 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.539e-6■□□□□ 10.4
DDX54-203ENST00000546869 ALDH1B1P30837 517 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 GCKRQ14397 625 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 CWF19L2Q2TBE0 894 aaKnown RBP18.39■□□□□ 0.53
DDX54-203ENST00000546869 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
DDX54-203ENST00000546869 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
DDX54-203ENST00000546869 SYNE4Q8N205 404 aa18.38■□□□□ 0.53
DDX54-203ENST00000546869 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
DDX54-203ENST00000546869 IRS4O14654 1257 aaPredicted RBP18.37■□□□□ 0.53
DDX54-203ENST00000546869 SF3B3Q15393 1217 aaKnown RBP18.37■□□□□ 0.53
DDX54-203ENST00000546869 ZNF622Q969S3 477 aaKnown RBP eCLIP18.37■□□□□ 0.53
DDX54-203ENST00000546869 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
DDX54-203ENST00000546869 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
DDX54-203ENST00000546869 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
DDX54-203ENST00000546869 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
DDX54-203ENST00000546869 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
DDX54-203ENST00000546869 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
DDX54-203ENST00000546869 SRCIN1Q9C0H9 1055 aa18.36■□□□□ 0.53
DDX54-203ENST00000546869 BRCA1P38398 1863 aaKnown RBP18.35■□□□□ 0.53
DDX54-203ENST00000546869 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
DDX54-203ENST00000546869 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
DDX54-203ENST00000546869 PLA2G12BQ9BX93 195 aa18.35■□□□□ 0.53
DDX54-203ENST00000546869 PDE8AO60658 829 aa18.34■□□□□ 0.53
DDX54-203ENST00000546869 BCAR3O75815 825 aa18.34■□□□□ 0.53
DDX54-203ENST00000546869 CASP7P55210 303 aa18.34■□□□□ 0.53
DDX54-203ENST00000546869 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
DDX54-203ENST00000546869 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
DDX54-203ENST00000546869 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
DDX54-203ENST00000546869 UTYO14607 1347 aa18.33■□□□□ 0.53
DDX54-203ENST00000546869 C7orf43Q8WVR3 580 aa18.33■□□□□ 0.52
DDX54-203ENST00000546869 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
DDX54-203ENST00000546869 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
DDX54-203ENST00000546869 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
DDX54-203ENST00000546869 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
DDX54-203ENST00000546869 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
DDX54-203ENST00000546869 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
DDX54-203ENST00000546869 GRM8O00222 908 aa18.31■□□□□ 0.52
DDX54-203ENST00000546869 BBOX1O75936 387 aa18.31■□□□□ 0.52
DDX54-203ENST00000546869 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
DDX54-203ENST00000546869 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
DDX54-203ENST00000546869 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
DDX54-203ENST00000546869 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
DDX54-203ENST00000546869 ZKSCAN2Q63HK3 967 aa18.3■□□□□ 0.52
DDX54-203ENST00000546869 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
DDX54-203ENST00000546869 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
DDX54-203ENST00000546869 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
DDX54-203ENST00000546869 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
DDX54-203ENST00000546869 ABCC4O15439 1325 aa18.29■□□□□ 0.52
DDX54-203ENST00000546869 CSF1RP07333 972 aa18.29■□□□□ 0.52
DDX54-203ENST00000546869 TRIM27P14373 513 aa18.29■□□□□ 0.52
DDX54-203ENST00000546869 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
DDX54-203ENST00000546869 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
DDX54-203ENST00000546869 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
DDX54-203ENST00000546869 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
DDX54-203ENST00000546869 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
DDX54-203ENST00000546869 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms