RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 CCDC87Q9NVE4 849 aa10.46□□□□□ -0.73
NPAS3-204ENST00000546849 POLIQ9UNA4 740 aa10.46□□□□□ -0.73
NPAS3-204ENST00000546849 CDC14CA4D256 554 aa10.45□□□□□ -0.74
NPAS3-204ENST00000546849 KHNYNO15037 678 aaKnown RBP10.45□□□□□ -0.74
NPAS3-204ENST00000546849 ATXN7O15265 892 aaPredicted RBP10.45□□□□□ -0.74
NPAS3-204ENST00000546849 FZD6O60353 706 aa10.45□□□□□ -0.74
NPAS3-204ENST00000546849 C8orf34Q49A92 452 aa10.45□□□□□ -0.74
NPAS3-204ENST00000546849 CMTR1Q8N1G2 835 aaKnown RBP10.45□□□□□ -0.74
NPAS3-204ENST00000546849 C7orf43Q8WVR3 580 aa10.45□□□□□ -0.74
NPAS3-204ENST00000546849 CITED4Q96RK1 184 aa10.45□□□□□ -0.74
NPAS3-204ENST00000546849 BRD7Q9NPI1 651 aa10.45□□□□□ -0.74
NPAS3-204ENST00000546849 FNDC3AQ9Y2H6 1198 aaKnown RBP10.45□□□□□ -0.74
NPAS3-204ENST00000546849 PDGFAP04085 211 aa10.44□□□□□ -0.74
NPAS3-204ENST00000546849 TYRO3Q06418 890 aa10.44□□□□□ -0.74
NPAS3-204ENST00000546849 FAM26DQ5JW98 314 aa10.44□□□□□ -0.74
NPAS3-204ENST00000546849 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
NPAS3-204ENST00000546849 NUDT16Q96DE0 195 aaKnown RBP10.44□□□□□ -0.74
NPAS3-204ENST00000546849 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
NPAS3-204ENST00000546849 ASB16Q96NS5 453 aa10.44□□□□□ -0.74
NPAS3-204ENST00000546849 DCDC2BA2VCK2 349 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 ANKRD33BA6NCL7 494 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 ITGA6P23229 1130 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 EHHADHQ08426 723 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 ECM1Q16610 540 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 KLRG1Q96E93 195 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 DMRTB1Q96MA1 342 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 RBCK1Q9BYM8 510 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 ZCCHC2Q9C0B9 1178 aaKnown RBP10.43□□□□□ -0.74
NPAS3-204ENST00000546849 PHF24Q9UPV7 400 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 PCDHGC4Q9Y5F7 938 aa10.43□□□□□ -0.74
NPAS3-204ENST00000546849 INPP5BP32019 993 aa10.42□□□□□ -0.74
NPAS3-204ENST00000546849 RTCBQ9Y3I0 505 aaKnown RBP10.42□□□□□ -0.74
NPAS3-204ENST00000546849 UBAP1LF5GYI3 381 aa10.41□□□□□ -0.74
NPAS3-204ENST00000546849 FAM157BP0CG42 384 aa10.41□□□□□ -0.74
NPAS3-204ENST00000546849 TMC7Q7Z402 723 aa10.41□□□□□ -0.74
NPAS3-204ENST00000546849 RGS22Q8NE09 1264 aa10.41□□□□□ -0.74
NPAS3-204ENST00000546849 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
NPAS3-204ENST00000546849 DMGDHQ9UI17 866 aaKnown RBP10.41□□□□□ -0.74
NPAS3-204ENST00000546849 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.74
NPAS3-204ENST00000546849 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
NPAS3-204ENST00000546849 KCNH4Q9UQ05 1017 aa10.4□□□□□ -0.74
NPAS3-204ENST00000546849 USP20Q9Y2K6 914 aa10.4□□□□□ -0.74
NPAS3-204ENST00000546849 OPLAHO14841 1288 aa10.39□□□□□ -0.75
NPAS3-204ENST00000546849 NEFLP07196 543 aa10.39□□□□□ -0.75
NPAS3-204ENST00000546849 DBN1Q16643 649 aa10.39□□□□□ -0.75
NPAS3-204ENST00000546849 DNAJC14Q6Y2X3 702 aaPredicted RBP10.39□□□□□ -0.75
NPAS3-204ENST00000546849 ZNF837Q96EG3 531 aaPredicted RBP10.39□□□□□ -0.75
NPAS3-204ENST00000546849 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
NPAS3-204ENST00000546849 ZNF438Q7Z4V0 828 aa10.38□□□□□ -0.75
NPAS3-204ENST00000546849 GJD3Q8N144 294 aa10.38□□□□□ -0.75
NPAS3-204ENST00000546849 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
NPAS3-204ENST00000546849 PNMA5Q96PV4 448 aa10.38□□□□□ -0.75
NPAS3-204ENST00000546849 BCL2L13Q9BXK5 485 aa10.38□□□□□ -0.75
NPAS3-204ENST00000546849 CUEDC1Q9NWM3 386 aaPredicted RBP10.38□□□□□ -0.75
NPAS3-204ENST00000546849 XYLBO75191 536 aa10.37□□□□□ -0.75
NPAS3-204ENST00000546849 LAMC2Q13753 1193 aa10.37□□□□□ -0.75
NPAS3-204ENST00000546849 ABHD17AQ96GS6 310 aa10.37□□□□□ -0.75
NPAS3-204ENST00000546849 ATXN7L1Q9ULK2 861 aaPredicted RBP10.37□□□□□ -0.75
NPAS3-204ENST00000546849 MAPTP10636 758 aaKnown RBP10.36□□□□□ -0.75
NPAS3-204ENST00000546849 PLCB3Q01970 1234 aa10.36□□□□□ -0.75
NPAS3-204ENST00000546849 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
NPAS3-204ENST00000546849 VWA5B2Q8N398 1253 aa10.36□□□□□ -0.75
NPAS3-204ENST00000546849 FAM129BQ96TA1 746 aa10.36□□□□□ -0.75
NPAS3-204ENST00000546849 MARK1Q9P0L2 795 aa10.36□□□□□ -0.75
NPAS3-204ENST00000546849 MAPK8P45983 427 aa10.35□□□□□ -0.75
NPAS3-204ENST00000546849 ATP2B2Q01814 1243 aa10.35□□□□□ -0.75
NPAS3-204ENST00000546849 EAPPQ56P03 285 aaPredicted RBP10.35□□□□□ -0.75
NPAS3-204ENST00000546849 KRT76Q01546 638 aa10.34□□□□□ -0.75
NPAS3-204ENST00000546849 TNP2Q05952 138 aa10.34□□□□□ -0.75
NPAS3-204ENST00000546849 ZNF326Q5BKZ1 582 aaKnown RBP10.34□□□□□ -0.75
NPAS3-204ENST00000546849 PDE12Q6L8Q7 609 aaKnown RBP10.34□□□□□ -0.75
NPAS3-204ENST00000546849 NIF3L1Q9GZT8 377 aa10.34□□□□□ -0.75
NPAS3-204ENST00000546849 AMOTL2Q9Y2J4 779 aa10.34□□□□□ -0.75
NPAS3-204ENST00000546849 A6NHS1 94 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 GPR25O00155 361 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 TREHO43280 583 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 BNIP3LO60238 219 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 CD33P20138 364 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 KCNQ4P56696 695 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 FGD1P98174 961 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 SFSWAPQ12872 951 aaKnown RBP10.33□□□□□ -0.76
NPAS3-204ENST00000546849 CCINQ13939 588 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 KRT25Q7Z3Z0 450 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 NPAS4Q8IUM7 802 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
NPAS3-204ENST00000546849 CFHR5Q9BXR6 569 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 GGNBP2Q9H3C7 697 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 C11orf16Q9NQ32 467 aa10.33□□□□□ -0.76
NPAS3-204ENST00000546849 GPR182O15218 404 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 EFSO43281 561 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 FGFR3P22607 806 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 COL19A1Q14993 1142 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 TRIP4Q15650 581 aaPredicted RBP10.32□□□□□ -0.76
NPAS3-204ENST00000546849 TTC39BQ5VTQ0 682 aaPredicted RBP10.32□□□□□ -0.76
NPAS3-204ENST00000546849 SNX29Q8TEQ0 813 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 GIPC2Q8TF65 315 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 PRR12Q9ULL5 1215 aa10.32□□□□□ -0.76
NPAS3-204ENST00000546849 KCNMB2Q9Y691 235 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms