RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
CCDC38-204ENST00000546816 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
CCDC38-204ENST00000546816 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
CCDC38-204ENST00000546816 DYRK3O43781 588 aa9.57□□□□□ -0.88
CCDC38-204ENST00000546816 LILRB5O75023 590 aa9.57□□□□□ -0.88
CCDC38-204ENST00000546816 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
CCDC38-204ENST00000546816 HIF1AQ16665 826 aa9.56□□□□□ -0.88
CCDC38-204ENST00000546816 TRAPPC3LQ5T215 181 aa9.56□□□□□ -0.88
CCDC38-204ENST00000546816 SCG3Q8WXD2 468 aaKnown RBP9.56□□□□□ -0.88
CCDC38-204ENST00000546816 SLC6A14Q9UN76 642 aa9.56□□□□□ -0.88
CCDC38-204ENST00000546816 RASA1P20936 1047 aa9.55□□□□□ -0.88
CCDC38-204ENST00000546816 SEC13P55735 322 aa9.55□□□□□ -0.88
CCDC38-204ENST00000546816 IER5Q5VY09 327 aa9.55□□□□□ -0.88
CCDC38-204ENST00000546816 ILDR2Q71H61 639 aa9.55□□□□□ -0.88
CCDC38-204ENST00000546816 GSX2Q9BZM3 304 aa9.55□□□□□ -0.88
CCDC38-204ENST00000546816 UBE2OQ9C0C9 1292 aaKnown RBP9.55□□□□□ -0.88
CCDC38-204ENST00000546816 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
CCDC38-204ENST00000546816 A0A0A0MRY4 1105 aa9.54□□□□□ -0.88
CCDC38-204ENST00000546816 C9orf172C9J069 976 aa9.54□□□□□ -0.88
CCDC38-204ENST00000546816 SELPP16109 830 aa9.54□□□□□ -0.88
CCDC38-204ENST00000546816 ADGRE1Q14246 886 aa9.54□□□□□ -0.88
CCDC38-204ENST00000546816 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
CCDC38-204ENST00000546816 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
CCDC38-204ENST00000546816 DMGDHQ9UI17 866 aaKnown RBP9.54□□□□□ -0.88
CCDC38-204ENST00000546816 MAFBQ9Y5Q3 323 aaPredicted RBP9.54□□□□□ -0.88
CCDC38-204ENST00000546816 ELNP15502 786 aa9.53□□□□□ -0.88
CCDC38-204ENST00000546816 NGLY1Q96IV0 654 aa9.53□□□□□ -0.88
CCDC38-204ENST00000546816 BCS1LQ9Y276 419 aa9.53□□□□□ -0.88
CCDC38-204ENST00000546816 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
CCDC38-204ENST00000546816 MBTPS1Q14703 1052 aa9.52□□□□□ -0.89
CCDC38-204ENST00000546816 RTN1Q16799 776 aa9.52□□□□□ -0.89
CCDC38-204ENST00000546816 CHMP7Q8WUX9 453 aaPredicted RBP9.52□□□□□ -0.89
CCDC38-204ENST00000546816 GLMNQ92990 594 aa9.52□□□□□ -0.89
CCDC38-204ENST00000546816 JPH1Q9HDC5 661 aaPredicted RBP9.52□□□□□ -0.89
CCDC38-204ENST00000546816 DNAJB12Q9NXW2 375 aaKnown RBP9.52□□□□□ -0.89
CCDC38-204ENST00000546816 TGFBR3LH3BV60 316 aa9.51□□□□□ -0.89
CCDC38-204ENST00000546816 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
CCDC38-204ENST00000546816 AFF1P51825 1210 aaKnown RBP9.51□□□□□ -0.89
CCDC38-204ENST00000546816 NUDT8Q8WV74 236 aa9.51□□□□□ -0.89
CCDC38-204ENST00000546816 LENG1Q96BZ8 264 aaPredicted RBP9.51□□□□□ -0.89
CCDC38-204ENST00000546816 IGFLR1Q9H665 355 aa9.51□□□□□ -0.89
CCDC38-204ENST00000546816 NAGPAQ9UK23 515 aa9.51□□□□□ -0.89
CCDC38-204ENST00000546816 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.51□□□□□ -0.89
CCDC38-204ENST00000546816 CCINQ13939 588 aa9.5□□□□□ -0.89
CCDC38-204ENST00000546816 PSMG3-AS1Q96PY0 264 aa9.5□□□□□ -0.89
CCDC38-204ENST00000546816 PTK7Q13308 1070 aa9.49□□□□□ -0.89
CCDC38-204ENST00000546816 CRTC2Q53ET0 693 aaPredicted RBP9.49□□□□□ -0.89
CCDC38-204ENST00000546816 PRSS36Q5K4E3 855 aa9.49□□□□□ -0.89
CCDC38-204ENST00000546816 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
CCDC38-204ENST00000546816 PSAPL1Q6NUJ1 521 aa9.49□□□□□ -0.89
CCDC38-204ENST00000546816 CLUAP1Q96AJ1 413 aa9.49□□□□□ -0.89
CCDC38-204ENST00000546816 H2AFB1P0C5Y9 115 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 H2AFB2P0C5Z0 115 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 NFKB1P19838 968 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 IGFBP4P22692 258 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 RAC1P63000 192 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 LARP1Q6PKG0 1096 aaKnown RBP9.48□□□□□ -0.89
CCDC38-204ENST00000546816 SHISA2Q6UWI4 295 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 TXNRD3Q86VQ6 643 aa9.48□□□□□ -0.89
CCDC38-204ENST00000546816 NRG1Q02297 640 aaPredicted RBP9.47□□□□□ -0.89
CCDC38-204ENST00000546816 DPYDQ12882 1025 aa9.47□□□□□ -0.89
CCDC38-204ENST00000546816 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
CCDC38-204ENST00000546816 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
CCDC38-204ENST00000546816 FMR1NBQ8N0W7 255 aaPredicted RBP9.47□□□□□ -0.89
CCDC38-204ENST00000546816 PNMA5Q96PV4 448 aa9.47□□□□□ -0.89
CCDC38-204ENST00000546816 HINFPQ9BQA5 517 aa9.47□□□□□ -0.89
CCDC38-204ENST00000546816 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
CCDC38-204ENST00000546816 LGR5O75473 907 aa9.46□□□□□ -0.9
CCDC38-204ENST00000546816 INPP5BP32019 993 aa9.46□□□□□ -0.9
CCDC38-204ENST00000546816 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
CCDC38-204ENST00000546816 DMRTC2Q8IXT2 367 aaPredicted RBP9.46□□□□□ -0.9
CCDC38-204ENST00000546816 RGS9O75916 674 aaPredicted RBP9.45□□□□□ -0.9
CCDC38-204ENST00000546816 MAP3K6O95382 1288 aa9.45□□□□□ -0.9
CCDC38-204ENST00000546816 GRIK5Q16478 980 aa9.45□□□□□ -0.9
CCDC38-204ENST00000546816 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
CCDC38-204ENST00000546816 PPP1R12CQ9BZL4 782 aa9.45□□□□□ -0.9
CCDC38-204ENST00000546816 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
CCDC38-204ENST00000546816 ZFATQ9P243 1243 aa9.44□□□□□ -0.9
CCDC38-204ENST00000546816 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
CCDC38-204ENST00000546816 ZBTB42B2RXF5 422 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L21D6R901 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 EPB42P16452 691 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 IDH3AP50213 366 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 PCSK7Q16549 785 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 ANKMY2Q8IV38 441 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 LPIN3Q9BQK8 851 aa9.43□□□□□ -0.9
CCDC38-204ENST00000546816 KRTAP9-2Q9BYQ4 174 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms