RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 CKAP2LQ8IYA6 745 aa19.57■□□□□ 0.72
CLPTM1-203ENST00000546079 NOL10Q9BSC4 688 aaKnown RBP19.57■□□□□ 0.72
CLPTM1-203ENST00000546079 DACT1Q9NYF0 836 aa19.57■□□□□ 0.72
CLPTM1-203ENST00000546079 PNMA6EA0A0J9YXQ4 647 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 SLU7O95391 586 aaKnown RBP19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 GNAI3P08754 354 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 VPS53Q5VIR6 699 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 KCND1Q9NSA2 647 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 ZNF446Q9NWS9 450 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 VPS37CA5D8V6 355 aaPredicted RBP19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 F6X3S4 739 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 SARM1Q6SZW1 724 aa19.56■□□□□ 0.72
CLPTM1-203ENST00000546079 USP54Q70EL1 1684 aa19.55■□□□□ 0.72
CLPTM1-203ENST00000546079 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
CLPTM1-203ENST00000546079 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
CLPTM1-203ENST00000546079 USP27XA6NNY8 438 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 KIF2AO00139 706 aaPredicted RBP19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 SULT6B1Q6IMI4 303 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 SCAND2PQ9GZW5 306 aaPredicted RBP19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 V9GYY5 206 aaPredicted RBP19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 NPHP3Q7Z494 1330 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 H2AFXP16104 143 aaPredicted RBP19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 CASTP20810 708 aaKnown RBP19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 MRFAP1L1Q96HT8 127 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 ST7Q9NRC1 585 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 CHMP3Q9Y3E7 222 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 ERBB3P21860 1342 aa19.54■□□□□ 0.72
CLPTM1-203ENST00000546079 G2E3Q7L622 706 aa19.53■□□□□ 0.72
CLPTM1-203ENST00000546079 SOX12O15370 315 aa19.53■□□□□ 0.72
CLPTM1-203ENST00000546079 SKILP12757 684 aa19.53■□□□□ 0.72
CLPTM1-203ENST00000546079 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
CLPTM1-203ENST00000546079 HNRNPH2P55795 449 aaKnown RBP19.52■□□□□ 0.72
CLPTM1-203ENST00000546079 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.72
CLPTM1-203ENST00000546079 SBNO1A3KN83 1393 aa19.52■□□□□ 0.72
CLPTM1-203ENST00000546079 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
CLPTM1-203ENST00000546079 GOLGA6L4A6NEF3 574 aa19.52■□□□□ 0.71
CLPTM1-203ENST00000546079 HTATSF1O43719 755 aaKnown RBP19.52■□□□□ 0.71
CLPTM1-203ENST00000546079 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.71
CLPTM1-203ENST00000546079 PLCD3Q8N3E9 789 aa19.52■□□□□ 0.71
CLPTM1-203ENST00000546079 ST3GAL1Q11201 340 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 DNAJC25Q9H1X3 360 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 ZSWIM6Q9HCJ5 1215 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 FLT4P35916 1363 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 PDCP20941 246 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 CCAR2Q8N163 923 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 PI4K2BQ8TCG2 481 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 L2HGDHQ9H9P8 463 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 FHOD1Q9Y613 1164 aa19.51■□□□□ 0.71
CLPTM1-203ENST00000546079 CPA1P15085 419 aa19.5■□□□□ 0.71
CLPTM1-203ENST00000546079 MCM10Q7L590 875 aa19.5■□□□□ 0.71
CLPTM1-203ENST00000546079 CCZ1BP86790 482 aa19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 CCZ1P86791 482 aaPredicted RBP19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 IQCB1Q15051 598 aa19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 ME3Q16798 604 aa19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 CNTROBQ8N137 903 aa19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 KCNB2Q92953 911 aa19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 FEZ2Q9UHY8 353 aaPredicted RBP19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 CYP46A1Q9Y6A2 500 aa19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 SOS1Q07889 1333 aaPredicted RBP19.49■□□□□ 0.71
CLPTM1-203ENST00000546079 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
CLPTM1-203ENST00000546079 ARID5BQ14865 1188 aa19.48■□□□□ 0.71
CLPTM1-203ENST00000546079 CDC37L1Q7L3B6 337 aa19.48■□□□□ 0.71
CLPTM1-203ENST00000546079 SPATA32Q96LK8 384 aa19.48■□□□□ 0.71
CLPTM1-203ENST00000546079 GOLGA6L19H0YKK7 550 aa19.48■□□□□ 0.71
CLPTM1-203ENST00000546079 IL1RAPL2Q9NP60 686 aa19.48■□□□□ 0.71
CLPTM1-203ENST00000546079 CRB1P82279 1406 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 CCDC69A6NI79 296 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 NUTM1Q86Y26 1132 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 LEO1Q8WVC0 666 aaPredicted RBP19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 JAKMIP1Q96N16 626 aaKnown RBP19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 TRIM34Q9BYJ4 488 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 KDRP35968 1356 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 NR1I2O75469 434 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 NLRP6P59044 892 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 FAM173BQ6P4H8 233 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 FERMT3Q86UX7 667 aa19.47■□□□□ 0.71
CLPTM1-203ENST00000546079 NPHP4O75161 1426 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 MAP4K4O95819 1239 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 RAD51AP2Q09MP3 1159 aa19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 PNMA6AP0CW24 399 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 CLCN6P51797 869 aa19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 ERCC6LQ2NKX8 1250 aa19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 ADCK5Q3MIX3 580 aa19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 CWC27Q6UX04 472 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 SSH3Q8TE77 659 aa19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 TRMT1Q9NXH9 659 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-203ENST00000546079 DTNBO60941 627 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 PLA2G4AP47712 749 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 CCDC93Q567U6 631 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 TAF7LQ5H9L4 462 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 MUM1L1Q5H9M0 696 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 TEX35Q5T0J7 233 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 GTF3C6Q969F1 213 aa19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
CLPTM1-203ENST00000546079 NECAB1Q8N987 351 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms