RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-205ENST00000545868 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
GABRB3-205ENST00000545868 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 MCM10Q7L590 875 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 KLRG1Q96E93 195 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 BRIP1Q9BX63 1249 aa12.9□□□□□ -0.34
GABRB3-205ENST00000545868 TEX13AQ9BXU3 409 aaPredicted RBP12.9□□□□□ -0.34
GABRB3-205ENST00000545868 C21orf2O43822 256 aa12.89□□□□□ -0.35
GABRB3-205ENST00000545868 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
GABRB3-205ENST00000545868 CLCN6P51797 869 aa12.89□□□□□ -0.35
GABRB3-205ENST00000545868 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
GABRB3-205ENST00000545868 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
GABRB3-205ENST00000545868 TAF1P21675 1872 aa12.89□□□□□ -0.35
GABRB3-205ENST00000545868 DZIP3Q86Y13 1208 aaKnown RBP12.88□□□□□ -0.35
GABRB3-205ENST00000545868 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
GABRB3-205ENST00000545868 SMC1BQ8NDV3 1235 aa12.88□□□□□ -0.35
GABRB3-205ENST00000545868 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
GABRB3-205ENST00000545868 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
GABRB3-205ENST00000545868 SRGNP10124 158 aa12.87□□□□□ -0.35
GABRB3-205ENST00000545868 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-205ENST00000545868 PDE6BP35913 854 aa12.87□□□□□ -0.35
GABRB3-205ENST00000545868 NBPF10Q6P3W6 841 aaKnown RBP12.87□□□□□ -0.35
GABRB3-205ENST00000545868 NBPF15Q8N660 670 aa12.87□□□□□ -0.35
GABRB3-205ENST00000545868 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
GABRB3-205ENST00000545868 LTBP3Q9NS15 1303 aa12.87□□□□□ -0.35
GABRB3-205ENST00000545868 U2AF1L5P0DN76 240 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-205ENST00000545868 U2AF1Q01081 240 aaKnown RBP eCLIP12.86□□□□□ -0.35
GABRB3-205ENST00000545868 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
GABRB3-205ENST00000545868 CFAP53Q96M91 514 aa12.86□□□□□ -0.35
GABRB3-205ENST00000545868 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
GABRB3-205ENST00000545868 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
GABRB3-205ENST00000545868 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
GABRB3-205ENST00000545868 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
GABRB3-205ENST00000545868 STYK1Q6J9G0 422 aa12.85□□□□□ -0.35
GABRB3-205ENST00000545868 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
GABRB3-205ENST00000545868 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
GABRB3-205ENST00000545868 COL4A5P29400 1685 aa12.85□□□□□ -0.35
GABRB3-205ENST00000545868 SNED1Q8TER0 1413 aa12.85□□□□□ -0.35
GABRB3-205ENST00000545868 SNRPA1P09661 255 aaKnown RBP12.84□□□□□ -0.35
GABRB3-205ENST00000545868 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 POTEJP0CG39 1038 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 ST5P78524 1137 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 COL13A1Q5TAT6 717 aaPredicted RBP12.84□□□□□ -0.35
GABRB3-205ENST00000545868 OLFM4Q6UX06 510 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
GABRB3-205ENST00000545868 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-205ENST00000545868 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-205ENST00000545868 HLFQ16534 295 aa12.83□□□□□ -0.36
GABRB3-205ENST00000545868 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
GABRB3-205ENST00000545868 CNKSR1Q969H4 720 aa12.83□□□□□ -0.36
GABRB3-205ENST00000545868 MIS18AQ9NYP9 233 aa12.83□□□□□ -0.36
GABRB3-205ENST00000545868 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
GABRB3-205ENST00000545868 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
GABRB3-205ENST00000545868 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-205ENST00000545868 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
GABRB3-205ENST00000545868 NPHP1O15259 732 aa12.81□□□□□ -0.36
GABRB3-205ENST00000545868 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
GABRB3-205ENST00000545868 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
GABRB3-205ENST00000545868 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
GABRB3-205ENST00000545868 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
GABRB3-205ENST00000545868 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
GABRB3-205ENST00000545868 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
GABRB3-205ENST00000545868 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
GABRB3-205ENST00000545868 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
GABRB3-205ENST00000545868 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
GABRB3-205ENST00000545868 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
GABRB3-205ENST00000545868 ZNF541Q9H0D2 1346 aa12.8□□□□□ -0.36
GABRB3-205ENST00000545868 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
GABRB3-205ENST00000545868 NPR1P16066 1061 aa12.79□□□□□ -0.36
GABRB3-205ENST00000545868 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
GABRB3-205ENST00000545868 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
GABRB3-205ENST00000545868 ZNF652Q9Y2D9 606 aa12.79□□□□□ -0.36
GABRB3-205ENST00000545868 HSPA1AP0DMV8 641 aaKnown RBP12.78□□□□□ -0.36
GABRB3-205ENST00000545868 HSPA1BP0DMV9 641 aaKnown RBP12.78□□□□□ -0.36
GABRB3-205ENST00000545868 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
GABRB3-205ENST00000545868 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-205ENST00000545868 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
GABRB3-205ENST00000545868 ZNF277Q9NRM2 450 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-205ENST00000545868 UBN2Q6ZU65 1347 aa12.78□□□□□ -0.36
GABRB3-205ENST00000545868 RIC1Q4ADV7 1423 aa12.78□□□□□ -0.36
GABRB3-205ENST00000545868 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-205ENST00000545868 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
GABRB3-205ENST00000545868 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.37
GABRB3-205ENST00000545868 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
GABRB3-205ENST00000545868 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-205ENST00000545868 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
GABRB3-205ENST00000545868 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
GABRB3-205ENST00000545868 LRRC37AA6NMS7 1700 aa12.76□□□□□ -0.37
GABRB3-205ENST00000545868 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
GABRB3-205ENST00000545868 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
GABRB3-205ENST00000545868 NGEFQ8N5V2 710 aa12.76□□□□□ -0.37
GABRB3-205ENST00000545868 TAF1DQ9H5J8 278 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-205ENST00000545868 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
GABRB3-205ENST00000545868 THSD7BQ9C0I4 1608 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms