RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 VPS72Q15906 364 aa8.91□□□□□ -0.98
LDHC-209ENST00000545848 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
LDHC-209ENST00000545848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.91□□□□□ -0.98
LDHC-209ENST00000545848 ABTB2Q8N961 1025 aa8.91□□□□□ -0.98
LDHC-209ENST00000545848 UNC93B1Q9H1C4 597 aa8.91□□□□□ -0.98
LDHC-209ENST00000545848 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
LDHC-209ENST00000545848 TRPC5Q9UL62 973 aaPredicted RBP8.91□□□□□ -0.98
LDHC-209ENST00000545848 DISP2A7MBM2 1401 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 EDC4Q6P2E9 1401 aaKnown RBP8.9□□□□□ -0.98
LDHC-209ENST00000545848 USP31Q70CQ4 1352 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 SPATA31A5Q5VU36 1347 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 SPATA31A7Q8IWB4 1347 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 CFAP99D6REC4 459 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 GCP02774 474 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 EHBP1Q8NDI1 1231 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 CCER1Q8TC90 406 aaPredicted RBP8.9□□□□□ -0.98
LDHC-209ENST00000545848 CARD14Q9BXL6 1004 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 PRDM11Q9NQV5 511 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 DOT1LQ8TEK3 1739 aa8.9□□□□□ -0.98
LDHC-209ENST00000545848 TUBGCP6Q96RT7 1819 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 SRCAPQ6ZRS2 3230 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
LDHC-209ENST00000545848 SH3BP2P78314 561 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 PRPF38BQ5VTL8 546 aaKnown RBP8.89□□□□□ -0.99
LDHC-209ENST00000545848 MYSM1Q5VVJ2 828 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 PTF1AQ7RTS3 328 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
LDHC-209ENST00000545848 VIRMAQ69YN4 1812 aaKnown RBP8.89□□□□□ -0.99
LDHC-209ENST00000545848 CLSPNQ9HAW4 1339 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 ZBTB7CA1YPR0 619 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 SEPT12Q8IYM1 358 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 TMC1Q8TDI8 760 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 HPS1Q92902 700 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 LIMD1Q9UGP4 676 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 ABCC6O95255 1503 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 NSD3Q9BZ95 1437 aa8.88□□□□□ -0.99
LDHC-209ENST00000545848 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 BTAF1O14981 1849 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 LYPD8Q6UX82 237 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 ARHGEF25Q86VW2 580 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 BAP1Q92560 729 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 NHSQ6T4R5 1651 aa8.87□□□□□ -0.99
LDHC-209ENST00000545848 AATKQ6ZMQ8 1374 aa8.86□□□□□ -0.99
LDHC-209ENST00000545848 SIAH2O43255 324 aa8.86□□□□□ -0.99
LDHC-209ENST00000545848 DEFB132Q7Z7B7 95 aa8.86□□□□□ -0.99
LDHC-209ENST00000545848 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
LDHC-209ENST00000545848 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
LDHC-209ENST00000545848 PKD1L3Q7Z443 1732 aa8.85□□□□□ -0.99
LDHC-209ENST00000545848 MEGF6O75095 1541 aa8.85□□□□□ -0.99
LDHC-209ENST00000545848 CTHP32929 405 aa8.85□□□□□ -0.99
LDHC-209ENST00000545848 QPCTQ16769 361 aa8.85□□□□□ -0.99
LDHC-209ENST00000545848 ZNF511Q8NB15 262 aa8.85□□□□□ -0.99
LDHC-209ENST00000545848 CRB1P82279 1406 aa8.85□□□□□ -0.99
LDHC-209ENST00000545848 ITGB4P16144 1822 aa8.84□□□□□ -0.99
LDHC-209ENST00000545848 TTC21AQ8NDW8 1320 aa8.84□□□□□ -0.99
LDHC-209ENST00000545848 RGPD3A6NKT7 1758 aaPredicted RBP8.84□□□□□ -0.99
LDHC-209ENST00000545848 RGPD4Q7Z3J3 1758 aa8.84□□□□□ -0.99
LDHC-209ENST00000545848 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
LDHC-209ENST00000545848 TSC1Q92574 1164 aa8.84□□□□□ -0.99
LDHC-209ENST00000545848 GGNBP2Q9H3C7 697 aa8.84□□□□□ -0.99
LDHC-209ENST00000545848 CCDC9Q9Y3X0 531 aaKnown RBP8.84□□□□□ -0.99
LDHC-209ENST00000545848 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
LDHC-209ENST00000545848 MAP3K19Q56UN5 1328 aa8.83□□□□□ -1
LDHC-209ENST00000545848 FYB1O15117 783 aa8.83□□□□□ -1
LDHC-209ENST00000545848 RRS1Q15050 365 aaKnown RBP8.83□□□□□ -1
LDHC-209ENST00000545848 NLRP13Q86W25 1043 aa8.83□□□□□ -1
LDHC-209ENST00000545848 ATP13A2Q9NQ11 1180 aa8.83□□□□□ -1
LDHC-209ENST00000545848 MAP10Q9P2G4 905 aa8.83□□□□□ -1
LDHC-209ENST00000545848 WASF2Q9Y6W5 498 aa8.83□□□□□ -1
LDHC-209ENST00000545848 PAPPAQ13219 1627 aa8.83□□□□□ -1
LDHC-209ENST00000545848 CASZ1Q86V15 1759 aa8.82□□□□□ -1
LDHC-209ENST00000545848 PER1O15534 1290 aaPredicted RBP8.82□□□□□ -1
LDHC-209ENST00000545848 LILRB3O75022 631 aa8.82□□□□□ -1
LDHC-209ENST00000545848 F12P00748 615 aaPredicted RBP8.82□□□□□ -1
LDHC-209ENST00000545848 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
LDHC-209ENST00000545848 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
LDHC-209ENST00000545848 KIF7Q2M1P5 1343 aa8.81□□□□□ -1
LDHC-209ENST00000545848 WDR17Q8IZU2 1322 aa8.81□□□□□ -1
LDHC-209ENST00000545848 TNS2Q63HR2 1409 aa8.81□□□□□ -1
LDHC-209ENST00000545848 LY75O60449 1722 aa8.81□□□□□ -1
LDHC-209ENST00000545848 VARSP26640 1264 aaKnown RBP8.81□□□□□ -1
LDHC-209ENST00000545848 KRT27Q7Z3Y8 459 aa8.81□□□□□ -1
LDHC-209ENST00000545848 RSPH6AQ9H0K4 717 aa8.81□□□□□ -1
LDHC-209ENST00000545848 BLMP54132 1417 aaPredicted RBP8.8□□□□□ -1
LDHC-209ENST00000545848 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
LDHC-209ENST00000545848 POLR3EQ9NVU0 708 aa8.8□□□□□ -1
LDHC-209ENST00000545848 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
LDHC-209ENST00000545848 NINLQ9Y2I6 1382 aa8.8□□□□□ -1
LDHC-209ENST00000545848 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
LDHC-209ENST00000545848 NCAPD2Q15021 1401 aa8.8□□□□□ -1
LDHC-209ENST00000545848 KAT6BQ8WYB5 2073 aa8.79□□□□□ -1
LDHC-209ENST00000545848 TMF1P82094 1093 aa8.79□□□□□ -1
LDHC-209ENST00000545848 USHBP1Q8N6Y0 703 aa8.79□□□□□ -1
LDHC-209ENST00000545848 MARCH10Q8NA82 808 aaPredicted RBP8.79□□□□□ -1
LDHC-209ENST00000545848 TIMELESSQ9UNS1 1208 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms