RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	UBE3B	Q7Z3V4	1068 aa		12.54	□□□□□ -0.4
NPIPA1-208	ENST00000545831	PPP1R42	Q7Z4L9	355 aa		12.54	□□□□□ -0.4
NPIPA1-208	ENST00000545831	NLRP10	Q86W26	655 aa		12.54	□□□□□ -0.4
NPIPA1-208	ENST00000545831	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.54	□□□□□ -0.4
NPIPA1-208	ENST00000545831	STK32B	Q9NY57	414 aa		12.54	□□□□□ -0.4
NPIPA1-208	ENST00000545831	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
NPIPA1-208	ENST00000545831	IGHD	P01880	384 aa		12.53	□□□□□ -0.4
NPIPA1-208	ENST00000545831	DEFB132	Q7Z7B7	95 aa		12.53	□□□□□ -0.4
NPIPA1-208	ENST00000545831	SUCLG2	Q96I99	432 aa		12.53	□□□□□ -0.4
NPIPA1-208	ENST00000545831	SRP68	Q9UHB9	627 aa	Known RBP	12.53	□□□□□ -0.4
NPIPA1-208	ENST00000545831	TRMT112	Q9UI30	125 aa	Known RBP	12.53	□□□□□ -0.4
NPIPA1-208	ENST00000545831	USP42	Q9H9J4	1324 aa	Known RBP	12.53	□□□□□ -0.4
NPIPA1-208	ENST00000545831	HSP90B1	P14625	803 aa	Known RBP	12.52	□□□□□ -0.41
NPIPA1-208	ENST00000545831	ZNF827	Q17R98	1081 aa		12.52	□□□□□ -0.41
NPIPA1-208	ENST00000545831	AMIGO3	Q86WK7	504 aa		12.52	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SETDB2	Q96T68	719 aa		12.52	□□□□□ -0.41
NPIPA1-208	ENST00000545831	UTP14A	Q9BVJ6	771 aa	Known RBP	12.52	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NUP98	P52948	1817 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	AFDN	P55196	1824 aa	Known RBP	12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	CASP7	P55210	303 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SLC15A2	Q16348	729 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	RTL5	Q5HYW3	569 aa	Predicted RBP	12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SUSD4	Q5VX71	490 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	TBC1D9B	Q66K14	1250 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	BICDL1	Q6ZP65	573 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	JARID2	Q92833	1246 aa	Predicted RBP	12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	GCC1	Q96CN9	775 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	BCL2L12	Q9HB09	334 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	KDM2B	Q8NHM5	1336 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SH3TC1	Q8TE82	1336 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	CDHR2	Q9BYE9	1310 aa		12.51	□□□□□ -0.41
NPIPA1-208	ENST00000545831	FAM177B	A6PVY3	158 aa		12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	GTF2E1	P29083	439 aa	Predicted RBP	12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	MTX1	Q13505	466 aa		12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SIRT2	Q8IXJ6	389 aa		12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	FAM89A	Q96GI7	184 aa		12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NYX	Q9GZU5	481 aa		12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	BICC1	Q9H694	974 aa	Known RBP	12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	UBN2	Q6ZU65	1347 aa		12.5	□□□□□ -0.41
NPIPA1-208	ENST00000545831	UBR3	Q6ZT12	1888 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	ANKRD36C	Q5JPF3	1778 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	BCOR	Q6W2J9	1755 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	PNMA6E	A0A0J9YXQ4	647 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	IRS4	O14654	1257 aa	Predicted RBP	12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SRGAP3	O43295	1099 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	GYS1	P13807	737 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	COL23A1	Q86Y22	540 aa	Predicted RBP	12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NLGN1	Q8N2Q7	840 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SSH3	Q8TE77	659 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	PLA2G12B	Q9BX93	195 aa		12.49	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SCN7A	Q01118	1682 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NPHP1	O15259	732 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	PDE8A	O60658	829 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NTSR2	O95665	410 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	POLA2	Q14181	598 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	RABL6	Q3YEC7	729 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	HSP90AB4P	Q58FF6	505 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	TPTE2	Q6XPS3	522 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SMC5	Q8IY18	1101 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	KAZALD1	Q96I82	304 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	DCTPP1	Q9H773	170 aa		12.48	□□□□□ -0.41
NPIPA1-208	ENST00000545831	PNPLA7	Q6ZV29	1317 aa		12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	FOXO4	P98177	505 aa		12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	NFIX	Q14938	502 aa		12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	EPHA10	Q5JZY3	1008 aa		12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	LMBR1L	Q6UX01	489 aa		12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	CHMP3	Q9Y3E7	222 aa		12.47	□□□□□ -0.41
NPIPA1-208	ENST00000545831	CARMIL3	Q8ND23	1372 aa		12.46	□□□□□ -0.41
NPIPA1-208	ENST00000545831	C4A	P0C0L4	1744 aa		12.46	□□□□□ -0.41
NPIPA1-208	ENST00000545831	SURF6	O75683	361 aa	Known RBP	12.46	□□□□□ -0.41
NPIPA1-208	ENST00000545831	PELP1	Q8IZL8	1130 aa	Known RBP	12.46	□□□□□ -0.41
NPIPA1-208	ENST00000545831	RAB11FIP3	O75154	756 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	CSF1R	P07333	972 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	TM4SF1	P30408	202 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	CTSW	P56202	376 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	CCDC57	Q2TAC2	916 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	ANKRD45	Q5TZF3	282 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	NUTM1	Q86Y26	1132 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	SYNE4	Q8N205	404 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	PDZRN3	Q9UPQ7	1066 aa		12.45	□□□□□ -0.42
NPIPA1-208	ENST00000545831	SERPINB2	P05120	415 aa		12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	HCLS1	P14317	486 aa	Predicted RBP	12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	OS9	Q13438	667 aa	Predicted RBP	12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	ERFE	Q4G0M1	354 aa		12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	SLC10A5	Q5PT55	438 aa		12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	EXOC6B	Q9Y2D4	811 aa		12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	NOP58	Q9Y2X3	529 aa	Known RBP	12.44	□□□□□ -0.42
NPIPA1-208	ENST00000545831	ANKRD18B	A2A2Z9	1011 aa		12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	ST5	P78524	1137 aa		12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	NUCB1	Q02818	461 aa		12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	IFIT5	Q13325	482 aa	Known RBP	12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	CCDC152	Q4G0S7	254 aa		12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	TAF7L	Q5H9L4	462 aa		12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	CHD1L	Q86WJ1	897 aa		12.43	□□□□□ -0.42
NPIPA1-208	ENST00000545831	ERC1	Q8IUD2	1116 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms