RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 MYD88Q99836 296 aa13.05□□□□□ -0.32
LINC00939-203ENST00000545784 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
LINC00939-203ENST00000545784 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
LINC00939-203ENST00000545784 SERPINB2P05120 415 aa13.04□□□□□ -0.32
LINC00939-203ENST00000545784 TRIM27P14373 513 aa13.04□□□□□ -0.32
LINC00939-203ENST00000545784 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
LINC00939-203ENST00000545784 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
LINC00939-203ENST00000545784 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 ATF7IPQ6VMQ6 1270 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 LINS1Q8NG48 757 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
LINC00939-203ENST00000545784 API5Q9BZZ5 524 aaKnown RBP13.03□□□□□ -0.32
LINC00939-203ENST00000545784 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 POLD1P28340 1107 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 CWF19L2Q2TBE0 894 aaKnown RBP13.03□□□□□ -0.32
LINC00939-203ENST00000545784 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
LINC00939-203ENST00000545784 NUP98P52948 1817 aa13.02□□□□□ -0.32
LINC00939-203ENST00000545784 NTSR2O95665 410 aa13.02□□□□□ -0.33
LINC00939-203ENST00000545784 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.33
LINC00939-203ENST00000545784 PLIN1O60240 522 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
LINC00939-203ENST00000545784 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
LINC00939-203ENST00000545784 ABCC4O15439 1325 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 GCKRQ14397 625 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 SLC4A10Q6U841 1118 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
LINC00939-203ENST00000545784 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
LINC00939-203ENST00000545784 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
LINC00939-203ENST00000545784 FAM177BA6PVY3 158 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 H7C1W4 665 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 ALDH1L1O75891 902 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 RLBP1P12271 317 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 SLC10A5Q5PT55 438 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
LINC00939-203ENST00000545784 ERFEQ4G0M1 354 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 NYXQ9GZU5 481 aa13□□□□□ -0.33
LINC00939-203ENST00000545784 TRMT112Q9UI30 125 aaKnown RBP13□□□□□ -0.33
LINC00939-203ENST00000545784 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
LINC00939-203ENST00000545784 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
LINC00939-203ENST00000545784 CASP7P55210 303 aa12.99□□□□□ -0.33
LINC00939-203ENST00000545784 CNBD1Q8NA66 436 aa12.99□□□□□ -0.33
LINC00939-203ENST00000545784 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
LINC00939-203ENST00000545784 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
LINC00939-203ENST00000545784 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
LINC00939-203ENST00000545784 JARID2Q92833 1246 aaPredicted RBP12.98□□□□□ -0.33
LINC00939-203ENST00000545784 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
LINC00939-203ENST00000545784 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
LINC00939-203ENST00000545784 DZIP1LQ8IYY4 767 aaKnown RBP12.98□□□□□ -0.33
LINC00939-203ENST00000545784 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
LINC00939-203ENST00000545784 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
LINC00939-203ENST00000545784 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
LINC00939-203ENST00000545784 UTYO14607 1347 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 SH3TC1Q8TE82 1336 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 PANK1Q8TE04 598 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 C10orf71Q711Q0 1435 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
LINC00939-203ENST00000545784 GRM8O00222 908 aa12.96□□□□□ -0.33
LINC00939-203ENST00000545784 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.33
LINC00939-203ENST00000545784 ST5P78524 1137 aa12.96□□□□□ -0.33
LINC00939-203ENST00000545784 ANKRD36CQ5JPF3 1778 aa12.96□□□□□ -0.33
LINC00939-203ENST00000545784 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
LINC00939-203ENST00000545784 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
LINC00939-203ENST00000545784 NBPF7P0C2Y1 421 aaPredicted RBP12.95□□□□□ -0.34
LINC00939-203ENST00000545784 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
LINC00939-203ENST00000545784 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
LINC00939-203ENST00000545784 UBE3BQ7Z3V4 1068 aa12.95□□□□□ -0.34
LINC00939-203ENST00000545784 FHDC1Q9C0D6 1143 aaPredicted RBP12.95□□□□□ -0.34
LINC00939-203ENST00000545784 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
LINC00939-203ENST00000545784 AAMPQ13685 434 aa12.95□□□□□ -0.34
LINC00939-203ENST00000545784 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
LINC00939-203ENST00000545784 KCNA3P22001 575 aa12.94□□□□□ -0.34
LINC00939-203ENST00000545784 CRY2Q49AN0 593 aa12.94□□□□□ -0.34
LINC00939-203ENST00000545784 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
LINC00939-203ENST00000545784 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
LINC00939-203ENST00000545784 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
LINC00939-203ENST00000545784 LRP5O75197 1615 aa12.94□□□□□ -0.34
LINC00939-203ENST00000545784 NPHP1O15259 732 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 PDE6BP35913 854 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 TGFB2P61812 414 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 GSE1Q14687 1217 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 SYT17Q9BSW7 474 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
LINC00939-203ENST00000545784 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
LINC00939-203ENST00000545784 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms